| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0049 |
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| Symbol | |
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| ID | 4179493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 69133 |
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| End bp | 70908 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638065926 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_672619 |
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| Protein GI | 110632411 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGTCTGCG CGGATGTCGT GCTTCGCCTT GGCGCTGATC TGCCAATGGC GGGTCTATAC
GAGATTTCAG CTCTTGTTGC TGCGATGGCA ATGGCGGCTT CCTTCGTTCG CCCGACACTT
CTATCCGATC ACATTGGAAT GGACCTCCTG GCGGAACGCG GGGATTTTCT CTCGCGGCTG
ATCCCCGCAG CCGTGACCTC CATCTTCATC GGGCTCGCCA CGTGGGCGTT GTTCCGCATG
GCAATGCATG CCTTTGCCAG CGCGGAGACG ACGCTGGTGG TCCGGTGGCC CACATGGCCA
TTCTGGTTTG CCGCGCTTTT CCTACTTTTC CCGGCTCTTC TCACCATGGC CGTGAATTTC
GGCGCCGTGC GGGAGAAACT GCCGGCATGG GATCGAGGCG CCTTGATCGT GCCATTCTTC
CTCCTGCTTG CGATCGGGAT TTTGGTGGCG ATCTTTGTCT ATCAGGACCA GCTTGGCCCG
GTTGCCAAGG GCGGACTTCT TTTCGGGGCG GTCTATGCGC TTGCCATGGC GCAAGTCCCC
ATCGGGATTT CAATGGGCAT CGTCGGCGTT ACGGGTGTTT GGGCCCTGCT CAGCACGCGT
GCAGCAGAAC GGGTGTTGCA GAACGAAGTC CGCGACGTGT TGTCGAGCAA TGAACTAATA
GCGATCCCTC TGTTCCTAAT GATGGGCAGT TTCGCCATCC GGGCCGGGCT GGCGGCGCGG
ATCTTCACGG CAGCCCGTGC GATATTCGGT CCGGTGCGCG GCGGCCTGGC CATCGCGACA
GTCGTCGGCT GCGGCGGGTT TGGGGCAGTC AGCGGGTCAT CCGTGGCCAC GACGGCGACA
CTCGGACGTG TGGCCTTCGA CGAGATGAGG GTGAACGGTT ACCGCCAAAG CTTTGCTTGC
GGTACGATTG CGGCAGGGGG AACTCTGGGC GCGCTGATCC CGCCTTCGGT CATTCTCATC
ATCTACTGCG TGGTGGCGGA GCAATCCATC GAGCGGGCCT TCGCGGCAGC GCTGTTTCCG
GGATTACTGG CGATCTTGCT CTATGCCGCC ACCATCGCCG TCATGGTGCG GCTGCGCCCG
GACGTAGCGC CACAGATGGC ACAGAAACCG CTGCGCGAGA TCCTGCGCGA TGTTCTTGGG
GCCTGGCCAC CCGCGCTGCT CTTCATCATT GTCCTGGCCG GTCTTTACGG AGGCCTTTTC
ACTTCGAGCG AAGCGGCAGC CGTGGGGTGC ATCCTTGCGC TCATATTCTG GGTTGTCGGC
GGGTCGTTTA CATTCGGTGC TCTCAGCGCC TCGCTTTTGG ATGCCATGAC CTCCAGTGCC
AAGCTCTACA TGGTTATACT TGGCGCCAGC CTGTTCGCGG CTCTTCTAAA CCTAACCGGG
CTTGCCCGCG TCGTCCTCAC ATGGGCAGAT CCCGCGACCA CCCCGCAGAT CGTGGTGCTG
CTGGCCTTCG TCGCGGTTTA CCTCATTCTT GGGGCGATCT TTGATTCCGT TGCAGCCCTT
CTAGTTACCG CGCCAATCGT CATTCCCGTA ATCGAGGGGT ACGGCCTCGA CCTCGTCTGG
TGGGGCATCG TGACGCTCAG CATGATCGAG ACGGGAATGA TCACGCCACC GATCGGGATG
AATGTTTTCG TTCTGCGGGG GGTGCTTGGC GGCGAGATCC GGCTGCAGGA CATCTATCGC
GGGATCTGGC CTTTCGTCTG CGCGGATCTG GTGCGGCTGG CACTGCTGCT CGCCATACCT
TCCATCGCCC TTTGGTTGCC GAGCGCGATA GGCTAG
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| Protein sequence | MVCADVVLRL GADLPMAGLY EISALVAAMA MAASFVRPTL LSDHIGMDLL AERGDFLSRL
IPAAVTSIFI GLATWALFRM AMHAFASAET TLVVRWPTWP FWFAALFLLF PALLTMAVNF
GAVREKLPAW DRGALIVPFF LLLAIGILVA IFVYQDQLGP VAKGGLLFGA VYALAMAQVP
IGISMGIVGV TGVWALLSTR AAERVLQNEV RDVLSSNELI AIPLFLMMGS FAIRAGLAAR
IFTAARAIFG PVRGGLAIAT VVGCGGFGAV SGSSVATTAT LGRVAFDEMR VNGYRQSFAC
GTIAAGGTLG ALIPPSVILI IYCVVAEQSI ERAFAAALFP GLLAILLYAA TIAVMVRLRP
DVAPQMAQKP LREILRDVLG AWPPALLFII VLAGLYGGLF TSSEAAAVGC ILALIFWVVG
GSFTFGALSA SLLDAMTSSA KLYMVILGAS LFAALLNLTG LARVVLTWAD PATTPQIVVL
LAFVAVYLIL GAIFDSVAAL LVTAPIVIPV IEGYGLDLVW WGIVTLSMIE TGMITPPIGM
NVFVLRGVLG GEIRLQDIYR GIWPFVCADL VRLALLLAIP SIALWLPSAI G
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