Gene Meso_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0005 
Symbol 
ID4179429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp4819 
End bp5490 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content61% 
IMG OID638065882 
Productribulose-5-phosphate 3-epimerase 
Protein accessionYP_672575 
Protein GI110632367 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.591326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCA GCCGGCCCGT CAAGATCGCG CCATCCATCC TCGCCTCCGA TTTCTCGCGC 
TTGGGTGAAG AGGTGACGGC AGTGGCCGCG GCCGGCGCGG ACTGGATTCA CCTGGACATC 
ATGGACGGGC ATTTCGTTCC GAATATCACA TTTGGCCCGC CCGTCGTGAA GGCCATTCGC 
GACCGGACAA ACAAGGTGTT CGATTGTCAT CTGATGATTG CGCCGGCGGA CCCTTACCTC 
GCCGCCTTCG CGGAAGCGGG ATGCGACGTG CTGACGGTCC ATGCGGAGGC TGGCCCGCAC 
CTCCACCGGT CGCTGCAGAC GATCAGGAAA CTGGGCAAGA AAGCGGGCGT TTCGCTCAAT 
CCGGCAACAC CGGAAAGCGC GATCGAATAT GTGCTGGACG ATGTTGACCT GATCCTGATC 
ATGACCGTCA ATCCCGGCTT CGGCGGGCAA GCCTTTATCC CTTCTGCGGT GAAGAAGATC 
CGGCGTGTGA GACAGATGGT GGGCAATCGG CCGATCGACA TTGAAGTGGA CGGGGGCATC 
ACCGCCGAAA ATGCGGGGGC AGTCGTTGCA GCCGGTGCCA ATGTGCTTGT GGCTGGCTCC 
TCGATCTTTA AAGGAAATGG GGAGGACGCC TACCGGCAGA ACATTGCCGC CATCAGGACG 
GCCGTTGAAT AG
 
Protein sequence
MEASRPVKIA PSILASDFSR LGEEVTAVAA AGADWIHLDI MDGHFVPNIT FGPPVVKAIR 
DRTNKVFDCH LMIAPADPYL AAFAEAGCDV LTVHAEAGPH LHRSLQTIRK LGKKAGVSLN 
PATPESAIEY VLDDVDLILI MTVNPGFGGQ AFIPSAVKKI RRVRQMVGNR PIDIEVDGGI 
TAENAGAVVA AGANVLVAGS SIFKGNGEDA YRQNIAAIRT AVE