| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_3179 |
|---|
| Symbol | |
|---|
| ID | 9252709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | - |
|---|
| Start bp | 3231187 |
|---|
| End bp | 3232254 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_003686510 |
|---|
| Protein GI | 297567538 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.588941 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGA AGCCCAGGGT CACCAGCTAC CAAGTCGCCC AGCGCGCTGG GGTCTCGAGG
ACTACAGTCT CGTTGGTGCT CAACGAAGTC CCGGGGGTCA ATATCCGTGA GGAGACCCGG
CGGCGGGTGC TCCGGGCCGC GGAGGAACTC GGCTATGTGC CCAATGCCGC TGCCCGTAGC
CTGGTGAGCG GGCAGACCCG CACGTTGGGG CTGGTGATCT CGCACGCCGA ACATCTCCAA
GTGGACGCCT TCATCCCGCA ACTGCTCTAC GGCTTCGGCC TTGTCAGCCG CCAGCGGGGC
TACCGGGTGC TCTTGGAAAC GGTCGAGGAC GTGACGAAAC CCGATGCCTA CACCGAACTG
GTGCGAGGAA ACCGAATCGA TGGGTTGGCG GTCTTGAACT TTCGCTGCGA CGATAGCCAG
CTCCCTGAGC TGATCCGGCG GGGCTTCCCG GTGGTGCTGA TCGGGTTTCA CCCCTGGCCT
GGCCTCGAGG ACAAGATCTT CGCCGTGGAG ACAGACGGGG TAGCGGCAGC GATACGAGCC
ACCCGGCACC TGATCGCGCT GGGCCACCGG CGAATCGCCC ACATCACTTT CTCGCCCGAG
AACTACTACG CTACCCAAGA CCGCCTTCGC GGTTACCGCC AGGCTTTGCA AGCCGCCGGA
ATCGAATGGG ATCCGGCCTG GGTGCGCTAT GGCAACTTTA GCGCGGCCAG CGGCTACCAA
GCCATGCGCC AACTGCTCCG GCGCAAACCC TACCCCACTG CGCTCTTCGC GGGCAACGAC
ACCATCGCCT TGGGGGCTAT GGCCGCCATC CACCGCAAGG GGCTGCGCAT CCCCGAGGAT
ATCGCCGTGG TAGGCTACGA TGACATCCCT ACCGCCCCCT ACATGGTTCC CCCCCTTACC
ACGGTGCGGA TTTCGCCCCT CGAGCAGGGG CGAATCGCGG CGGAGATGCT CTCGGGGCTC
ATCGAGGGGA ACCCTCCCCA GCATAGGCGC ATCTGCCTTC CCGCCCCGCT CATCGTGCGT
GAGTCCTGCG GGGCAAAGCG GCAAAGGGCG GTTAGCGCTG GGAGGTGA
|
|---|
| Protein sequence | MTGKPRVTSY QVAQRAGVSR TTVSLVLNEV PGVNIREETR RRVLRAAEEL GYVPNAAARS
LVSGQTRTLG LVISHAEHLQ VDAFIPQLLY GFGLVSRQRG YRVLLETVED VTKPDAYTEL
VRGNRIDGLA VLNFRCDDSQ LPELIRRGFP VVLIGFHPWP GLEDKIFAVE TDGVAAAIRA
TRHLIALGHR RIAHITFSPE NYYATQDRLR GYRQALQAAG IEWDPAWVRY GNFSAASGYQ
AMRQLLRRKP YPTALFAGND TIALGAMAAI HRKGLRIPED IAVVGYDDIP TAPYMVPPLT
TVRISPLEQG RIAAEMLSGL IEGNPPQHRR ICLPAPLIVR ESCGAKRQRA VSAGR
|
|---|
| |