Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_2636 |
Symbol | |
ID | 9252153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 2679356 |
End bp | 2679982 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | channel protein, hemolysin III family |
Protein accession | YP_003685993 |
Protein GI | 297567021 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.274302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGGG AACCCTTCAA TACCTATTCC CACCTTACCG GCGCGATTCT GGCCCTGGTA GGAACCATCG TGTTGCTTCT GCTCTCGCAG GGGGATACGG CCAAGTGGGT GGGGGCCTTG GTGTTTGGGG TCTCCATGAC CGTGATGTAC GTCTCCTCTT CGCTCTATCA CGCCCTTAAG GTTTCGGAGA AAACCCTACA GGGCCTGCGC CGCCTGGATC ACGCAGCTAT ATTTTTGTTC ATCGCAGGAA CCTACACCCC GGTGGTGTTA CAGGGGCTCG AGCCCTCCTG GAAACCCTGG GCCCTGGGTA TCGTGTGGGG ATTGGCCGTG TTCGGGGTCT TCTTTCGGGT CTTCGTGCTC AAAGCCCCAC GCTGGCTCTA CACCCTCAGC TACGTGGGCC TAGGCTGGCT GGTGGTGTTC TTCTGGCCTA AGCTCGACCT CAATATTTGG GCCTTGGTCT GGCTGATCGC TGGGGGCCTG GCGTATAGCC TGGGTGCCAT CAACTACGCC ACCAAGTGGC CCGATCCCTG GCCTCAAGTA GTCGGCTTCC ATGGCCTATG GCACCTCTTT GTGCTGGCTG GGAGCATCTT TATGTACCTG GCGGTGCTGG CGCTGTATTT GCAATAA
|
Protein sequence | MIREPFNTYS HLTGAILALV GTIVLLLLSQ GDTAKWVGAL VFGVSMTVMY VSSSLYHALK VSEKTLQGLR RLDHAAIFLF IAGTYTPVVL QGLEPSWKPW ALGIVWGLAV FGVFFRVFVL KAPRWLYTLS YVGLGWLVVF FWPKLDLNIW ALVWLIAGGL AYSLGAINYA TKWPDPWPQV VGFHGLWHLF VLAGSIFMYL AVLALYLQ
|
| |