| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1991 |
|---|
| Symbol | |
|---|
| ID | 9251504 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1986945 |
|---|
| End bp | 1987973 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003685373 |
|---|
| Protein GI | 297566401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000248153 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACA GTTCCGGGCG GAATTCCCGC TGGATTGTTA TCGTGCTGGC GTTGCTCTTG
ACGCAAAGCC AGGCCCAGCA AAAAGTGGTC AATGTTTTGT GCAGCGTGAC GCAAAACTGG
TGCGAATCCC TGGGTCCGGC GTTCAAACAA GCCACCGGGA TCGACGTGCG AATTGTGAGC
CTCTCGACCA ACGAGGCTCT GGCTCGTTTG CGGGCCGAAC AGGCCAACCC GACTTTTGAT
GTGTGGTTTG GCGGCACCGG CGATCCCCAT TACGAAGCCT TCAAGGACGC CATCACCGAG
TGGTACCGGG TCAAGGCCTA TAAAGACCTC TCGCAAAACA TGAAAGACGC CATCGGGGCG
ACCTACACCC CGCTCTATCA GGGCATCCTG GGCTTCGGCA TCAACCCCAA GGTACTGCAA
GAGCGTGGCG CTCCCATTCC CAAGTGCTGG AAGGATCTCT CCAACCCTGC CTATAAGGGC
CTGATCCAAG TCGCCAACCC CAATACCTCG GGCACCGCCT ACACCATGAT CGCCACCTTG
GTACAGCTCT TTGGCGAAGA CGAAGCCTTC AACGTGATGC GCAGCTTTCA CCGCAACGTG
GCCGAGTACA CCCGAAGCGG TGTGGCTCCC CGAATTGCGC TGGGCCGAGG CGAGATCGGG
ATCGGGATCC AGTTCATGCA CGACCTGGTG GAGTTCAAGA AGCAGGGCTT CCCAATCGAG
ATCGTGGCCC CCTGCGAGGG GACCGGCTAC GAAATCGGGG GCTTGAGCCT GGTGCGCGGG
GCCAAGAACA AGGCCAACGC ACAGGCTTTC ATGGACTGGG CGGTAAGCCC AGGGGCCCAG
CAACTGGCCT TCAAGGCCGG GGCCTTCTCC TTGCCCTCCA ACACCAAGAC CCCGCTGGTG
GAAGATGTGC CCGACCCCAA AGACTTCAAG CTCATCAAGT ACGACAACAA GAAGTATGGC
GACCCCGACC TCCGCACCCG GCTTATCACC CGCTGGACTC GAGAGATCTT CCCCCTCCCC
CGGAGGTAG
|
|---|
| Protein sequence | MKYSSGRNSR WIVIVLALLL TQSQAQQKVV NVLCSVTQNW CESLGPAFKQ ATGIDVRIVS
LSTNEALARL RAEQANPTFD VWFGGTGDPH YEAFKDAITE WYRVKAYKDL SQNMKDAIGA
TYTPLYQGIL GFGINPKVLQ ERGAPIPKCW KDLSNPAYKG LIQVANPNTS GTAYTMIATL
VQLFGEDEAF NVMRSFHRNV AEYTRSGVAP RIALGRGEIG IGIQFMHDLV EFKKQGFPIE
IVAPCEGTGY EIGGLSLVRG AKNKANAQAF MDWAVSPGAQ QLAFKAGAFS LPSNTKTPLV
EDVPDPKDFK LIKYDNKKYG DPDLRTRLIT RWTREIFPLP RR
|
|---|
| |