| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1970 |
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| Symbol | |
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| ID | 9251483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Meiothermus silvanus DSM 9946 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014212 |
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| Strand | - |
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| Start bp | 1958530 |
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| End bp | 1962174 |
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| Gene Length | 3645 bp |
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| Protein Length | 1214 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003685353 |
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| Protein GI | 297566381 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0403753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCATC GCGACGGTGT ACGAATATGC CACGCAGCGC ATGTCGGAGG CCTAGAGTTT
CACGTTTCGG CCGAAGCGCG CCGTTACTAC CAGTTTGACC TATCGGTGTT CTCTTCCTCG
GGCAATGTGG TCTTCGCCGA CTTTGAAGCC GCCCGGCGCT TCGCTGCGGC CATGAACGCC
AAACGCGATC TGGTGAACCA CCCCGAGTCG GCGGTGAGCG CGGCCCAGAT CGCAGCGATG
GGGCTCATCG ACGAGATGCT GCACTATGTA GTGGCGCAGT ATCGCCAGGG ACAAAACCCC
CGCGTCATGC TCGAGGCCCT TTCGACGCTC GAGTACACCA TAGGTGCCGA TACCCTGGAA
ACCGCCCTGC GGGCCTTTGC CCAGGAATTC CCCCCGATCC GGGTCTACCG GGGCGAGATC
GCGCTGGACG AATATCTCTC GGGCAGCACG GAGATGCTTC TTTCCCCGGG CAGCGGGGTG
GGGCGGGCTA ATCGAGAAAT CCTGCTGGAA GAGATGTTGA TGCTCTGGAT GGCCAACGCC
AACCCGGCCT TCGCACCTTT CCTAGAACTT TTCGACGACA CCCCGCTCGA GCGCTCTACC
GCCTACCCGG CCATCATCCA AAACCTGGAG GCCTTCTTTG AGGCCCAACC CCCGTTTGCG
GAGAGCGGCC TAAGCCTATT CCGCACCCTG CGCCTTCCCG CTTTAATGCA CCCTGACTCG
CTCGAGGCCC AGCTCGAGTT CCTGCTCAAA CGCTTCGGTG GCACCCTGGG CCCATTCGCG
CGGCGCATCC TGACCGGGAT CGGCGTGCTC AAAGAAGCGG CCCGGTCGTT TTGGACGCCG
GTTCATTTCG ACACCCCACC GGGCCACGGG ATCACCGCTG AGATGTATAA CTGGCGCTCG
AGGGGTGCTG AGCATGAACC CGAAGCCTTC AGCCCCGACG TGGACTGGAT GCCCCGAGTG
GTGCTGATCG CCAAAAATAC CTTTGTCTGG CTAGACCAAC TCTCGAAAAA ATACGCCCGG
CCCATCACCA CCCTAGACCA GATCCCCGAG GAGGAGCTGG ACATCCTGGC CAGCTGGGGC
ATCACCGCCT TGTGGCTGAT CGGCCTATGG GAGCGGAGCG CGGCCTCCAA GCGGATCAAG
CAGATGATGG GAAATCCCGA CGCGGTGGCT TCTGCTTATT CGCTGTACGA TTACGTCATT
GCCAAAGAGC TGGGAGGCGA AGCGGCGCTG GAGGTGCTGC GGCAAAAAGC CTGGCAGCGC
GGCATCCGCC TGGCCTCGGA CATGGTTCCT AACCACACCG GCATCGACAG CAAATGGGTG
ATCGAACACC CCGACTGGTT CATCAGCCTC CCCTACCCGC CGTATCCCAA CTACACCTTT
AGCGGCCCCG ATCTATCCTC AGACCCCCGG GTAGGGATCT TCCTCGAGGA CCACTACTAC
GACAAATCCG ACGCCGCCGT GGTATTCAAG CGGGTAGACC GCCGCTCGGG TGAGGTCCGC
TACATCTACC ACGGCAACGA CGGTACCGCT ATGCCCTGGA ACGATACCGC CCAGCTCAAT
TACCTCAACC CCGAGGTACG CGAGGCGGTG ATACAGACGA TTGTGCACGT AGCCCGGCAG
TTCCCGCTGA TCCGCTTTGA CGCGGCCATG ACCTTGGCCA AGCGGCACAT CCAGCGGCTG
TGGTGGCCCG AGCCGGGGGG AAGCCCCTGG GGACCGGCCA TCCCCAGCCG AGCCGAACAC
GCCATGACCA AGGAAGAGTT CGACCGGCTC ATGCCCAAAG AATTCTGGCG CGAGGTAGTT
GACCGCTGCG CGGTGGAGGC CCCCGATACT CTTTTGCTGG CCGAGGCTTT TTGGATGATG
GAGGGCTACT TTGTGCGCAC CTTGGGAATG CACCGGGTCT ACAACTCGGC TTTCATGAAT
ATGCTGCGCG ATGAGAAAAA CGGCGAGTAC CGGGCCATCA TGAAAAACAC CTTGGAATTC
GAGCCGGAGA TACTGAAGCG CTTCGTCAAT TTCCTCAACA ACCCCGATGA AAAGACTGCG
GTAGAGCAAT TCGGCAAGGG AGACAAGTAT TTCGGGGTGA TGACCTTATG CGCTACGCTG
CCGGGATTGC CCATGGTCGG GCACGGGCAG GTAGAGGGCT TTACCGAACG CTACGGGATG
GAATACCGGC GGGCTTACTA CGACGAAACC CCCGACCAAG GGCTCATCCA GTACCACTAC
CAGCAAATCT TCCCCCTATT CAAGCGGCGC TATCTTTTTG CCGAGGTGGA AAACTTCGTT
CTCTATGACT TCTCCTCAGG GGGGAGCGTC AACGAGGACG TGTTCGCCTA TTCCAACCGC
CAACAGGGTG AGCGCTCCCT GATCGTTTAC CACAACAAAA ACGTCCAAAC CAAAGGGTGG
GTTCATACCT CGGTGGCCCA GACAGTGAAA ACGGGAGAAG GCCGGGAGAT GCTAAAACGT
ACGCTGGGGC AGGGGTTGGG GCTTTCCTTC GACACCTGGG CTATCTTCCG CGATATGGTC
AGCGGCCTGG AGTACCTACG CCCTTCCCGC GAACTCCATG AACAGGGGCT TTACCTCGAG
CTAGGCCCCT ATCAGCGGCA CGTCTTCCTG GATTGGCGTG AGGTGAACGA CCCCGACGGC
ACCTATGCGC GCATCGCCCA CATGTTGGGG CAGCGAGGAG TGCCCAGTGT GGAGCAGGTG
CGGCGGGAGC TTTGGCTCGA GCCCATCCTG ACCCCTTTCC GCCAGCTCGT CAACCCGCAG
CTGTTCGAGA AGCTGATCGG AGCCAGGGTT AGCAAAGGAA AGCCCGACAA GGCGGTGCTG
GACGAGGTCA CCAATAAGCT CGGGGCGCTT GTGGAGGCCG CGCGAGGGTT CGGAGGCGTG
TGTTTCGCTG CGGGAAAGCA GCGAGGAAGG CCTAGCTCCA ATCTCAAAGT CTTCCGAAAG
CAGCTCGAGG CTTTGTTACG ATTGCCCGCC TTCGTGGAGG AGACAAGCAA GCCTGCCGCT
CGGGTAACCC CAAACAAGTC CACCGCGGCC AGCCTCAAAC GCAAGCCGAA AAGAGTCCTC
CGCAGTTCCC TGCCCGCTAG CCTGGACGAT CGGGTCGAGA ACTGGGGGGT CCTCTTGGGC
TGGCTATTTG TCCAACCCTT AGCCGAAGAT CCCCAGACCC GTGCCAGCCT GTTCGATGAG
TGGCTGCTGG GCCGGGTCTT GGCTGACACC CTACGGGAGA TGGGACTTGG CGAGAGCGAG
GCCGAACGCT CGGTGGGGCT GGTCAAGGTA CTCCTAGCGG AGCAGCCCCG GCTGGCTGAG
GAAGCCCCCA AGCCCAAAAG GGCTAAGGAA CAGCTCGAGG CCTGGATGCA AGACCCGCTG
ATCCAGCGCT ATTTGCAAAC CCACCGCTTC GAAGGAGCGG TGTATTTCAA CAAGGAAGCT
TTCGAGGCGA TGCTTTCGGC TATGGTCCGG CTGGTGGCGG TGGTATCCGC TAGCATGCCG
AAGCGCAAGG TGGCGGACAC CCGGCGGATC GTGCAAGAGT GGTACGCGGT GCTCGAGCGC
TACCGCTTAG CGGCGCTCAA GGCCGGATAC CGCTTGGACA AGCTGCTTAA ACCCGCTCCC
GCCCGCAAGC CGCGCCCACC GAAAAAGCCG ACTACAACGG TATAA
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| Protein sequence | MGHRDGVRIC HAAHVGGLEF HVSAEARRYY QFDLSVFSSS GNVVFADFEA ARRFAAAMNA
KRDLVNHPES AVSAAQIAAM GLIDEMLHYV VAQYRQGQNP RVMLEALSTL EYTIGADTLE
TALRAFAQEF PPIRVYRGEI ALDEYLSGST EMLLSPGSGV GRANREILLE EMLMLWMANA
NPAFAPFLEL FDDTPLERST AYPAIIQNLE AFFEAQPPFA ESGLSLFRTL RLPALMHPDS
LEAQLEFLLK RFGGTLGPFA RRILTGIGVL KEAARSFWTP VHFDTPPGHG ITAEMYNWRS
RGAEHEPEAF SPDVDWMPRV VLIAKNTFVW LDQLSKKYAR PITTLDQIPE EELDILASWG
ITALWLIGLW ERSAASKRIK QMMGNPDAVA SAYSLYDYVI AKELGGEAAL EVLRQKAWQR
GIRLASDMVP NHTGIDSKWV IEHPDWFISL PYPPYPNYTF SGPDLSSDPR VGIFLEDHYY
DKSDAAVVFK RVDRRSGEVR YIYHGNDGTA MPWNDTAQLN YLNPEVREAV IQTIVHVARQ
FPLIRFDAAM TLAKRHIQRL WWPEPGGSPW GPAIPSRAEH AMTKEEFDRL MPKEFWREVV
DRCAVEAPDT LLLAEAFWMM EGYFVRTLGM HRVYNSAFMN MLRDEKNGEY RAIMKNTLEF
EPEILKRFVN FLNNPDEKTA VEQFGKGDKY FGVMTLCATL PGLPMVGHGQ VEGFTERYGM
EYRRAYYDET PDQGLIQYHY QQIFPLFKRR YLFAEVENFV LYDFSSGGSV NEDVFAYSNR
QQGERSLIVY HNKNVQTKGW VHTSVAQTVK TGEGREMLKR TLGQGLGLSF DTWAIFRDMV
SGLEYLRPSR ELHEQGLYLE LGPYQRHVFL DWREVNDPDG TYARIAHMLG QRGVPSVEQV
RRELWLEPIL TPFRQLVNPQ LFEKLIGARV SKGKPDKAVL DEVTNKLGAL VEAARGFGGV
CFAAGKQRGR PSSNLKVFRK QLEALLRLPA FVEETSKPAA RVTPNKSTAA SLKRKPKRVL
RSSLPASLDD RVENWGVLLG WLFVQPLAED PQTRASLFDE WLLGRVLADT LREMGLGESE
AERSVGLVKV LLAEQPRLAE EAPKPKRAKE QLEAWMQDPL IQRYLQTHRF EGAVYFNKEA
FEAMLSAMVR LVAVVSASMP KRKVADTRRI VQEWYAVLER YRLAALKAGY RLDKLLKPAP
ARKPRPPKKP TTTV
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