| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1953 |
|---|
| Symbol | |
|---|
| ID | 9251465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1942403 |
|---|
| End bp | 1943221 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003685336 |
|---|
| Protein GI | 297566364 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00018631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.714727 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTGC AGACACCTGT AGAGACCAAG ACTGCCATTG AAGTACGGGA TCTGAAGAAA
GTATTTCGTA AGCGCGAGGG AATGTTTCGC AGTGTAGTGA AGGAAGAATG GGCGCTCAAG
GGGGTGAGCT TCCACGTTTA CGAGGGGGAA ACCTATGGCC TGTTGGGCCC GAATGGCTCG
GGGAAGTCTA CCCTCATTCG CATCCTCTCC ACCTTGCTTA CCGCCGATGG CGGTACGGTG
CGAATGCTAG GGCACAAGCT ACCCGAGGGC GAGCGCGAGC TGCGCCGGAA GATGGGCCGG
GTGAGCGTGG ACGCAGCCTT CTACAAGAAG CTCTCACCGC GCGAAAACCT GCTCTACGCC
GCGCAGCTCT ATGGCCTCGA GCCCAAAAAG GCCGAGAAAC GGGCGATGGA GATCTTAGAA
CGCCTGGGGA TCGAGTCTCG CCGCTTCACC GACCCCATCG AGGAGATGAG CCGGGGAATG
CAGCAGAAGA TCGCCATCAC CCGCGCGCTA CTCATCAACC CGCCGTTACT GTTGCTGGAC
GAGCCCACCA CCGGTTTAGA CCCCAAGAGC CGTCGTGATG TACAGACATT TCTGGAGGAT
TTACGCCGTG AAGAGGGAAC TACCATTCTC CTCACCACCC ACGACATGGC CGAGGCCGAG
AGGCTTTCCG ACCGCATCGG TTTCCTGGCC CATGGTCGTC TGGTGGCGGA AGGGAGCGCA
GCGGATCTCA AAGCGCAAGC TGGAACCGAT GATCTCGAAG AGGCTTTCAT TGTCCTAACC
GGCGAGGAGA TCAAAAAGGA CGAAGAAGAG AGCGTCTAA
|
|---|
| Protein sequence | MTLQTPVETK TAIEVRDLKK VFRKREGMFR SVVKEEWALK GVSFHVYEGE TYGLLGPNGS
GKSTLIRILS TLLTADGGTV RMLGHKLPEG ERELRRKMGR VSVDAAFYKK LSPRENLLYA
AQLYGLEPKK AEKRAMEILE RLGIESRRFT DPIEEMSRGM QQKIAITRAL LINPPLLLLD
EPTTGLDPKS RRDVQTFLED LRREEGTTIL LTTHDMAEAE RLSDRIGFLA HGRLVAEGSA
ADLKAQAGTD DLEEAFIVLT GEEIKKDEEE SV
|
|---|
| |