Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_1471 |
Symbol | |
ID | 9250971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | - |
Start bp | 1469583 |
End bp | 1471805 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | protein-export membrane protein SecD |
Protein accession | YP_003684871 |
Protein GI | 297565899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000674169 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGTCGCGCA AATGGGTAAC TGGAATTTTC TTACTCTTGC TGTTTTTGGC TTCCCTGCTG GTGCTATGGA AGCCCTGGGC TCCGGGTGAG CCCAAAATCA AGCTAGGCCT GGACTTGCAA GGTGGCTTGC GCATCGTTCT CGAGCCCACC ACCCCTACCT TCACTCGCCA AGACCTAGAC GTAGCCCGCA CGGTGATCGA GAACCGAGTG AACGCCCTTG GCGTAGCTGA GCCCTTGGTT CAGATCCAGG GCAACCGCCG CATCGTGGTG GAGCTCCCTG GGCTGTCCAA AGCTGATGAG GACCGGGCCA TTCGGCTCAT CGGCCAGACT GCGGTGCTGG AGTTCCGCAT CCTCAACGAA AACGCTCAGG GGCTTACTGT CGCGGATATC AATCAGCAAA AGCGGGCTAA CCCCAACCTA GACACCAAAT CGCTCGAGCA GCGGCTGTTC AAACAGAGCG ATTTAGGCCC GGTGCTGCTC ACCGGTAAGG ACCTCGCTAA CGCCCAGGCC ACCTTCGACC AGTTTGGCCG CCCCCAGGTC TCGCTCACCT TCACCGGCGA GGGGGCCAAG AAGTTTGAGG AGGTCACGCG GCAAAACATA GGTCGCCGTC TGGCGGTGGT GCTAGACGGC AAGGTCTTTA CCGCCCCCAC CATCCGTAGC GCTATCAGCG GCGGCCAGGC GGTGATCGAG GGGCTTTCGG GGCTCGAGGA AGCCTCTGAG ATCGCCCTAG TACTGCGCTC TGGTTCGCTA CCGATCAGCC TGCGCGAAGC CGAGACCCGC GCCATCGGCC CCACCCTGGG CCAGGATGCT ATCCGCTCGG GCATCTACGC GGGCATCGTC GGAACAGTGC TGATCTTTGT GCTCATCTTT GCCTACTATG GCTTCTGGCT GGGGCTGGTA GCGGCTTTGG GCCTGATCTA TACCAGCGTG CTGATCCTGG GGATCATCTC TGGGCTCAGC GCCACATTGA CCTTACCGGG CATCGCTGGC CTGATTCTGA CCCTGGGCGC TGCTGTAGAC GGCAACGTGC TCTCCTTCGA GCGCATCAAG GAGGAGATCA AGCACGGCAA ACGGTTCCGC CAGGCTATTC CCGGCGGTTT CCAGCACTCG ATCATCACCA TTTTGGATGT AAACGCCTGC CACCTCCTGG CGGCGGCGGC TTTGTACCAG TATTCCACCG GCCCGGTCAA GGGCTTCGCG GTGATGCTGG CGGTGGGCGT GGTAGCCTCG GTATTCTCCA ACCTGGTGTT CAGCCGGTGG CTCTTGGACC GCATCGCTGA GCGCCGCGAG GTCAAACCGC TGTACTGGGT CTGGGGCTCG CGCTTCCAGT TCATGAAGTG GGCCCGTTAC ATCACCACAT TCAGCCTGAT CCTCGCTGTT ATCGCCGGAA GCATCGCATT GGTCAAAGGA TTCAACCTCG GCATCGACTT CACTGGGGGC ACGGCCTTTA CTGTACGAAC TGGAGATAAA ACCACCACCG AGGATATTCG CAGCTTCCTG AGCCAAGCAG GCATCCCCGG AGCTGCCGGG AACGAGGCCA TCATCACCGC CGTGGCCACC CAACAAGGCC GCGAGTACAC CGTGCGGGTG CGGCAGCTCA CCGAGGAGAA CCGCATCCAG CTCGAGCGCC TCTTCCAAGA GCGCCTCTCC GCTCAGGTCT TGCAATCCGA AACGGTAGGC CCCTCGGTAG GGTCGGAGCT AAGGCGCAAC ACCATCTACG CGGTGCTGAT CGGGCTGGCG CTGATCATGG TCTACGTGGC CTTCCGCTTC GACTGGATGT TCGGCCTGGG CAGCATTATC GCGGTGGCCC ACGACGTAGC TATCGTGGCT GGGATGTATA GCCTGTTCGG GCTCGAGTTC ACCATCCCCA CCGTGGCGGC CTTGCTCACC ATCATCGGTT ACTCACTCAA CGACTCGATC ATCATCTCCG ACCGCATCCG CGAAAACCTC AAAGACCCGC AAAACCGGGG CAAGAGCTAC CGGGAGATCT TCGACTTGGC CATCAATCAG ACCCTCTCGC GCACCGTCAT GACCACCCTC ACCACCTTGC TTCCGGTGAT CGCCTTGCTG TTCTTAGGCG GCTCGGTGCT GCGCGACTTC TCGTTGGCCA TCACGGTAGG GATATTCGTA GGGACCTACT CCTCTATCTA CGTGGTGTCG GCCTTGGTGG TAGCCTGGAA GACCCGCCAG GCCCAGCGGC AAAAACTGGC CAAAGCCCGC TAG
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Protein sequence | MSRKWVTGIF LLLLFLASLL VLWKPWAPGE PKIKLGLDLQ GGLRIVLEPT TPTFTRQDLD VARTVIENRV NALGVAEPLV QIQGNRRIVV ELPGLSKADE DRAIRLIGQT AVLEFRILNE NAQGLTVADI NQQKRANPNL DTKSLEQRLF KQSDLGPVLL TGKDLANAQA TFDQFGRPQV SLTFTGEGAK KFEEVTRQNI GRRLAVVLDG KVFTAPTIRS AISGGQAVIE GLSGLEEASE IALVLRSGSL PISLREAETR AIGPTLGQDA IRSGIYAGIV GTVLIFVLIF AYYGFWLGLV AALGLIYTSV LILGIISGLS ATLTLPGIAG LILTLGAAVD GNVLSFERIK EEIKHGKRFR QAIPGGFQHS IITILDVNAC HLLAAAALYQ YSTGPVKGFA VMLAVGVVAS VFSNLVFSRW LLDRIAERRE VKPLYWVWGS RFQFMKWARY ITTFSLILAV IAGSIALVKG FNLGIDFTGG TAFTVRTGDK TTTEDIRSFL SQAGIPGAAG NEAIITAVAT QQGREYTVRV RQLTEENRIQ LERLFQERLS AQVLQSETVG PSVGSELRRN TIYAVLIGLA LIMVYVAFRF DWMFGLGSII AVAHDVAIVA GMYSLFGLEF TIPTVAALLT IIGYSLNDSI IISDRIRENL KDPQNRGKSY REIFDLAINQ TLSRTVMTTL TTLLPVIALL FLGGSVLRDF SLAITVGIFV GTYSSIYVVS ALVVAWKTRQ AQRQKLAKAR
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