| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_1468 |
|---|
| Symbol | |
|---|
| ID | 9250968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 1464927 |
|---|
| End bp | 1466429 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | 4-alpha-glucanotransferase |
|---|
| Protein accession | YP_003684868 |
|---|
| Protein GI | 297565896 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00033046 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAC CGCGTTCGTT TGGGATCCTC CTACACCCCA CGAGCTTTCC CGGCCGCTGG
GGAATCGGCA CCTTGGGTGC TGAAGCCCGG CGGTTTGTGG ATTGGCTGGC TTCTACCGGG
GCCCACTGGT GGCAGGTATT GCCCCTAGGG CCTACCAGCT ACGGCGACTC ACCCTACCAG
TCTTTCTCGG CCTTCGCCGG AAACCCCTAC TTGATTGACC CGGATATCCT CATAGAGAAG
GGTTGGCTCG AGCCCGAGGA ACCCCCCGCC TACCCACCCC ACAAGGTGGA CTACGGCTGG
CTCTATGTCA CCCGCTGGGA TCTGCTGCGG CGGGCCTACG ATGGCTTTGT GGGGCGGGGG
AAACCGGAGG ACCTCGAGGC CTTCGCCCGC TACCGCCAGC AGGAGGCGGA TTGGCTCGAG
GACTATGCCT TATTCATGGC CCTCAAGCAC TCCTTCGGGG GCCGGCCCTG GAACGAGTGG
ACCGCTCCTT TGCGCAGGCG CGAACCCGCG GCGCTCGAGC AAGCCCGCAA AGAGTACGCC
GACGAGATAG GTTTCCACGC CTGGACCCAG TGGGTTTTCT TCCAGCAATG GGGGGATTTG
CGCAACTATG CACACGCGCG GGGCATCAAG CTGATCGGAG ATATGCCCAT TTTCCTGGCC
TATGACTCCT CCGATGTGTG GGCCAACCCG CAGTATTTCT ATCTTGACGC CGAAGGGCTC
CCCACGGTGG TGGCTGGGGT TCCGCCGGAT TACTTCTCCG AGACCGGGCA GCTTTGGGGT
AACCCGCTCT ACCGCTGGGA GGTGATGCAG GCCGAGGGGT TTGGCTGGTG GATTCACCGC
ATCAAGAAGT CGCTCGAGGC CTGCGAATTG GTGCGCATCG ACCATTTTCG CGGCTTTGAG
GCATACTGGG AAGTTCCCTT CGGTGAGCCT ACCGCGGTCA AGGGGCGGTG GGTCAAGGCT
CCCGGCAAGG AACTGTTTCA GGCGGTGCGC GCGGCCTTGG GCGATGCGGC GATCATCGCG
GAGGATTTAG GGGTGATCAC CCCGGAGGTG GAGGAACTCC GCGATTCCAA TGGCTTCCCG
GGCATGAAGA TACTTCAGTT TGCTTTCTCT GACGAGACCA ACCCGTTCTT ACCGCATAAC
TACCCCGAGT CCGGAAATGT GATCGTCTAC ACCGGCACCC ACGACAACGA CACCACCATC
GGCTGGTACC AGACCGCCCC CAAGGAAGAA CTCGCGTTCA TGGACAAGTA CCTCGAGCAG
TATGGCTTGA AGATCGAAAA ACCCGAGGAC GCCCCTTGGG TGCTGGCCGA ACTGGGCTTC
CGCTCGAGGG CCAAGCTGGT GATTCTGCCC TTGCAGGACG TGCTGCGTTT GGGCCCCGAG
GCCCGTATGA ACTTCCCCGG AACGCTGGGC AACAACTGGA GTTGGCGCTA TGCCCCGGGG
GACCTTACCC CAGAGTTGGC ACTGCACTTG CGGGAACTGG CCCGCTCCAG CGACCGCTTG
TAA
|
|---|
| Protein sequence | MDIPRSFGIL LHPTSFPGRW GIGTLGAEAR RFVDWLASTG AHWWQVLPLG PTSYGDSPYQ
SFSAFAGNPY LIDPDILIEK GWLEPEEPPA YPPHKVDYGW LYVTRWDLLR RAYDGFVGRG
KPEDLEAFAR YRQQEADWLE DYALFMALKH SFGGRPWNEW TAPLRRREPA ALEQARKEYA
DEIGFHAWTQ WVFFQQWGDL RNYAHARGIK LIGDMPIFLA YDSSDVWANP QYFYLDAEGL
PTVVAGVPPD YFSETGQLWG NPLYRWEVMQ AEGFGWWIHR IKKSLEACEL VRIDHFRGFE
AYWEVPFGEP TAVKGRWVKA PGKELFQAVR AALGDAAIIA EDLGVITPEV EELRDSNGFP
GMKILQFAFS DETNPFLPHN YPESGNVIVY TGTHDNDTTI GWYQTAPKEE LAFMDKYLEQ
YGLKIEKPED APWVLAELGF RSRAKLVILP LQDVLRLGPE ARMNFPGTLG NNWSWRYAPG
DLTPELALHL RELARSSDRL
|
|---|
| |