Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mesil_1235 |
Symbol | |
ID | 9250729 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Meiothermus silvanus DSM 9946 |
Kingdom | Bacteria |
Replicon accession | NC_014212 |
Strand | + |
Start bp | 1219059 |
End bp | 1219685 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | CRISPR-associated protein, Cse3 family |
Protein accession | YP_003684640 |
Protein GI | 297565668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00100035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.670253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTATCTGA GCCGACTCCT GCTTGACCCC CGTCACAAGC AAGCCCGCAC CGACCTCGCC AACCCCTACC AGATGCACGC CACCCTCTGC CACGCCTTTG CCGAACCCGA GCAAACCCCA CCGCGCTTTC TATGGCGGGC CGAAGAGGGC AAAACCCCGA CGGTGCTGGT GCAGAGCATT GAAACGCCGA ACTGGGAAAA ACTGACGCAG CGTTTCCCCG GCTACTTTTC TCAAAGGCCA GAGTCCAAGC CGATCCCCCT CGAGCACCTC CAGAGCGGCC AGGTGCTGCG CTTCCGCCTG CGGGCCAACC CCACCGTCAC CCGCAAGGAC CCCCAGAACC CCCAAAAAAG TAAACGGCAC GGCTTGAAGG AGGTCGAAGA ACAGCTCGAG TGGCTCTCGC GCCAGGGCAG GAAGGGCGGC TTCGCCGTGC TCGGGGCGAT GGTGGCCCAG AGCGAGCGGG TGAAGATGTT CAAGCACACC GGAGGTAGCC CCATCGTGCT TCAGTCCGTA CTCTACGATG GCCACCTCAG GATCACCGAC CTCGAGGCTT TCAAAAACAC CCTCACCGGC GGCCTGGGCC ACGCAAAAGC TCTTGGTTTC GGCCTCCTGT CCATCGCCAG GGGGTGA
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Protein sequence | MYLSRLLLDP RHKQARTDLA NPYQMHATLC HAFAEPEQTP PRFLWRAEEG KTPTVLVQSI ETPNWEKLTQ RFPGYFSQRP ESKPIPLEHL QSGQVLRFRL RANPTVTRKD PQNPQKSKRH GLKEVEEQLE WLSRQGRKGG FAVLGAMVAQ SERVKMFKHT GGSPIVLQSV LYDGHLRITD LEAFKNTLTG GLGHAKALGF GLLSIARG
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