Gene Mesil_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_1170 
Symbol 
ID9250663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp1162027 
End bp1163220 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content58% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003684577 
Protein GI297565605 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.441465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.43389 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGA GTCTTCTAGC AGCAGCCGTG TTGGCAATGG GCCTGGCTAT GGCCCAGGGC 
AAGATCACGG TGTGGACCCA CTACGGCGGC CCCGAGCTCA CCTGGCTCAA GCAACAGGCG
GAAACCTTTA AGAAAACCAG CGGCACCCAG GTAGAAGTGG TAGAGGTGCC GTTTGGGGAT
ATTCAGAACA AGTTCATCTT GGGCGCCCCG CAAGGCCAGG CGTCTGACCT CATCGTGAGC
ATCCCCCACG ACTGGGTAGG CGCCATGGCT TCGGCAGGGG TGCTCGAGCC CATGGGTAAA
TACGCCACCT CGAGCTACCT GCAAGGGCTA AGCGATGTAG CGGTACAGGC GCTTTCTTAC
AAGAACCAGC TCTTCGCCTT ACCCATGTTC GCCGAGTCGG TAGCGCTCAT CTACAATAAG
AAGTTCGTCA AGACCGCACC CAAGACCTGG GATGAATTCC TCAAGGTTGC CCAGGAAAAC
ACCAAGGGCA ACACCTTCGG CTTCCTCTAC AATATCGGCG ATCCTTACTT CAATTACGGC
TTCTTCGCGG CCTATGGGGC CTCGGTTTTC GCCAGCAGCG GGGGAAACCT CAATACCAGC
GAAGTACGCC TAGGCGGGGA GGCTGGGGTC AAGGCCCTGA ACTTCATCAA GGATCTGCGG
TACAAGTACA AGCTGGTCCC CGAGGGCGTG GATTACGGGG TGGCTGACGG AGCCTTCAAA
GACGGCTCTT TGGCCATGAT CATCAATGGC CCCTGGGCTA TCGGTGACTA CAAGAAAGCT
AAAATCGACT TTGGGATCGC ATCCTTCCCC GCTCCGCCCG GTGGCTCGGC CTGGAAGCCT
TTTGTAGGTG TACAGGGGGT AGCCATCAAT GCCTACTCCA AGAACAAGAC CGCTGCCGCT
AACTTTGCTA AGCTCCTCGT AAGCGAACAA AGCCAAATCT CCTTCAACCA AGCCGGAGGG
CGCATCCCGG TCTCCAAGGC TGCCGTGGCC CGCCTCAAGG ACGATCCCGT AGTGGCTGGG
TTCTCGCCGG TGATCGCCAG CGGTACCCCC ATGCCCAACA TCCCCGAGAT GGGTAAGGTC
TGGGGCCCCT GGGGCAATGC CATCCAGCAG GCCATCCAGA AGCCGGATAC GAACGTCCAG
AAGATCGTCG ACGACATGGT AGCGGAGATT CGCAAGGGCA TCGCGGGCAA ATAA
 
Protein sequence
MKRSLLAAAV LAMGLAMAQG KITVWTHYGG PELTWLKQQA ETFKKTSGTQ VEVVEVPFGD 
IQNKFILGAP QGQASDLIVS IPHDWVGAMA SAGVLEPMGK YATSSYLQGL SDVAVQALSY
KNQLFALPMF AESVALIYNK KFVKTAPKTW DEFLKVAQEN TKGNTFGFLY NIGDPYFNYG
FFAAYGASVF ASSGGNLNTS EVRLGGEAGV KALNFIKDLR YKYKLVPEGV DYGVADGAFK
DGSLAMIING PWAIGDYKKA KIDFGIASFP APPGGSAWKP FVGVQGVAIN AYSKNKTAAA
NFAKLLVSEQ SQISFNQAGG RIPVSKAAVA RLKDDPVVAG FSPVIASGTP MPNIPEMGKV
WGPWGNAIQQ AIQKPDTNVQ KIVDDMVAEI RKGIAGK