Gene Mesil_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0708 
Symbol 
ID9250197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp696687 
End bp697658 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content67% 
IMG OID 
ProductCRISPR-associated protein Cas1 
Protein accessionYP_003684131 
Protein GI297565159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000161833 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00702489 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCCTCC ACCTCACCGA GCAGTCCTCC ACCCTGCGCC TCAGAGCGGG GCGGCTTTTG 
GTGGAGCTGG ACGAGCAAAT CCTGGCCGAG CTTCCGGCCC GCAAGGTGCG GGGGGTGGTG
GTCTGGGGTA ATGTGCGGCT CACCACCCCG GCGCTGGCCT TTTTGCTGCG CCAGGGGGTG
CCGGTGCTAT ACGCCACCTT GGAGGGTCAG CTTTACGGGC AGGCCCAGGC CCCCCAGAGC
CTTGCCCCCC AAGTGCTGCG GGCGCAGATG CAGGCTCAGC AAGACCCTCT TCCGCTGGCC
CAAAGCTTTT TGCAAGGCAA GCTGCGCTCG GAACTGATAT TGCTCGAGCG CCTTTCCCGC
CAAGCTCCCA CCGCGCTCCA GCAGGCCGAG ATCCGCGCCG CTCTTTCGGA CCTACCCCAA
ACCAGGGGCC TCGAGGCCCT GCGCGGGGTG GAGGGAAGCG CGGCTAGGGC TTACTTTGCC
GGGCTTCAGG CGGTGCTCTC TCCCTACGGT TTCGCAGGGC GCAACCGCCG CCCACCCACC
GACGCCGTAA ACGCTGCACT CTCGTACGGC TATATGGTGC TTTTGGGCCG CACCCTGCTG
GCCTTGCACC TGGCGGGCCT GCACCCCGAG TTGGGCCTTT TGCACGCCGA GGGCCGCCGG
GCCCCCGCGT TGGCCTTCGA CCTGATGGAG GAGTTCCGGG TTGCGGTGGT GGATGTCATC
GTTACGGCGG CCTTCCTACG CGGCGAGCTG GACCTCCAGA AGCACGCCGA GGCCCGTGAC
GGCGGAGTCT ACCTAAACGA CACTGGGCGC AAGGTGCTGC TCAAGCTGCT GGAAGGGCGC
CTGGCCCAAG AGGCCCAACA CCCCAAGGGC TTCCGCAAGC CCTACCAAGA ACTCATCGAA
GCCCAGGCCG CCCGGCTCAA GGCGGCCATC CTAGGGCGCG AAGCCTATAC ACCCTTCTAC
CTCTGGAGGT GA
 
Protein sequence
MTLHLTEQSS TLRLRAGRLL VELDEQILAE LPARKVRGVV VWGNVRLTTP ALAFLLRQGV 
PVLYATLEGQ LYGQAQAPQS LAPQVLRAQM QAQQDPLPLA QSFLQGKLRS ELILLERLSR
QAPTALQQAE IRAALSDLPQ TRGLEALRGV EGSAARAYFA GLQAVLSPYG FAGRNRRPPT
DAVNAALSYG YMVLLGRTLL ALHLAGLHPE LGLLHAEGRR APALAFDLME EFRVAVVDVI
VTAAFLRGEL DLQKHAEARD GGVYLNDTGR KVLLKLLEGR LAQEAQHPKG FRKPYQELIE
AQAARLKAAI LGREAYTPFY LWR