Gene Mesil_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMesil_0040 
Symbol 
ID9249516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMeiothermus silvanus DSM 9946 
KingdomBacteria 
Replicon accessionNC_014212 
Strand
Start bp44740 
End bp45732 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content63% 
IMG OID 
Producttranscriptional regulator, LacI family 
Protein accessionYP_003683496 
Protein GI297564524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACGA TCAAGGACGT CGCCAAGCTC GCTGGTGTTT CCATCGCCAC CGTATCCAAC 
GTGCTCAACG GCGGGCGGTA TGTAAGCCCC GAGCTTCGCA GCGCGGTGTT GCAAGCAGTC
CGCACCCTCG GCTACGTACC CAACGGGGTC GCCCAAAGCC TGCGCAGCCG TAAGACGCAA
ACCCTCGGCC TTATCGTCCC GGATATCACC AACCCTTTCT TCAGCGGACT GGTACAGGCC
CTCGAGCGCT CGGCGCGGGA TCGGGGTTAC CAGATGCTCC TATGCAACAG CGAGGAAAAC
GCTGAGCTCG AGTTCGATCT GGCCTTAGCC CTGGCCAGCC GCCAGGTGGA CGGCCTTATC
GTGATTCCCA CCCAGGACTC CCCCGAGTAT CTGCGCAAGC TCAAGGCAGA TGGGCTGCCG
GTGGTACTCC TCGACCGCAT CGGCGGGGAA GACGACTTGG ACCGGGTGGG GGTGGATAAC
TTCCAAGCTG CCCGGGTCGG CACCGAGTTT TTGATCCGGC AGGGGCACCG CGAGATCCTG
CTGTTGGTGA GCACCCTCGA GCTTTCCAAC ATCCGCGACC GGGCCGAAGG ATACCGCCAG
GCGCTCGCCG CAGCGGGGAT CCCCCAAGAC CCCCAGTGGG TCATCGAGTG CGGCAAGGAC
GCCCCCTCGC TGGAAGCCGT GCTCGAGGCC ATCCAGCACC ACCGGCCTAC GGCCATCTTC
GCCAGCACCA ACCGGCTTAG CCTTTTGGCC ATCCAGGCCA TCCGCCGCCT CAAGCTAGGG
TTTCCCGAGG AAATCTCCCT GCTGGGCTTT GATGATTTCG AGTGGAGCAC CCTGCTCGAG
CCCTACCTGA GCGCGGTGGT TCAACCCATC GAGGCATTGG GCTTCCAGGC CGCTCAGATC
CTGCTGGATA GGCTCAAAGG AGACACCAGT CCGCCCAAGC GGGTGCTCTT GCCTTGCGAT
CTGGCGGTGC GCCAATCGGT GCAAAGGAGG TGA
 
Protein sequence
MATIKDVAKL AGVSIATVSN VLNGGRYVSP ELRSAVLQAV RTLGYVPNGV AQSLRSRKTQ 
TLGLIVPDIT NPFFSGLVQA LERSARDRGY QMLLCNSEEN AELEFDLALA LASRQVDGLI
VIPTQDSPEY LRKLKADGLP VVLLDRIGGE DDLDRVGVDN FQAARVGTEF LIRQGHREIL
LLVSTLELSN IRDRAEGYRQ ALAAAGIPQD PQWVIECGKD APSLEAVLEA IQHHRPTAIF
ASTNRLSLLA IQAIRRLKLG FPEEISLLGF DDFEWSTLLE PYLSAVVQPI EALGFQAAQI
LLDRLKGDTS PPKRVLLPCD LAVRQSVQRR