| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mesil_0001 |
|---|
| Symbol | |
|---|
| ID | 9252697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Meiothermus silvanus DSM 9946 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014212 |
|---|
| Strand | + |
|---|
| Start bp | 126 |
|---|
| End bp | 1445 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | chromosomal replication initiator protein DnaA |
|---|
| Protein accession | YP_003683457 |
|---|
| Protein GI | 297564485 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00780596 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.982574 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGTCAGC AGACTATCTG GCAAAACGTC CTGGACTACG TACGCCAGAA CATCAACGAC
GTGGAGTATC ACACCTGGTT TGAAAAGATC CGGCCCCTAG GCGTACACGG CGGGGTACTG
GAACTCGGCG TGCCTACTTC CTTCGCTGGG GAGTGGATAA AGAAGCATTA TGCTGAGCTG
ATTCAAGAGG CCTTGACCCG CTTAGGAGCC CAAACCCCTC GGTTTGAACT CAAGGTAGTC
CCAGGAAATC CCGTCCAGGA AGATATTTTC TCTGCACCCG TCCAAGCCCC TGCCCCCGAT
CCCCGATCCC GACTCAACCC CAAATACACC TTCGAAAACT TCGTGGTGGG TCAGAACAAC
CGCTTAGCCC ACGCCGCGGC CATGGCGGTT GCTGAATCGC CGGGGAAGGC GTACAATCCG
CTCTTTATTT ACGGGGGAGT GGGGTTAGGC AAGACGCACC TGATGCACGC CGTGGGGCAC
TCGGTAGCGG CCCGCTTCCC TAGCTTGAGG ATCGAATATG TCTCCACCGA GACCTTCACC
AACGAGTTGA TCAACGCCAT CCGCGAGGAC CGCATGACCG AGTTTCGAGA GCGCTATCGT
TCGGTGGATC TGCTCCTTGT GGATGACATC CAGTTCGTAG CAGGCAAGGA GCGTACCCAG
GAGGAGTTTT TTCATACCTT CAATGCGCTT TATGAAGCGC ACAAACAGAT CATCCTATCC
TCCGACCGCC CTCCCAAGGA TATTCTCACC CTCGAGGCCC GGCTGCGGAG CCGCTTCGAA
TGGGGACTCA TTACCGATAT CCAGCCACCC GAACTCGAGA CCCGCATAGC TATTCTCAAA
ATGAATTCTG AATATCGGAG CATGCGCATC CCCGAGGAAG TGCTCGAGTA TATTGCGCGT
CAGGTCACCT CCAACATCCG CGAGTTGGAG GGGGCACTCA TGCGGGTAAT CGCCTATGCG
TCGTTAAATG GAGTAGAGAT CACTAAGAAC GTAGCCGCCC GGGCGCTCTC AGATGTATTC
ACAGCCCGCG AAACCGATTT CAGCCCCGAT GATATCCTGC GGGCGGTAGC GGATCACTAT
GGGTTACGAA CCGACGAACT CAAGGGGGCC GGTCGCCGCA AAGAGGTGGT GATCCCCCGG
CAAATAGCTA TGTTCCTGAT CCGCGAACTC ACCCAGTCCT CGCTTCCCGA GATCGGGCAG
TTCTTCGATG GACGGGATCA TACCACCGTG CTCTACGCTA TCCAAAAAGT TCAGGAGTTG
GCAGATAGCG ATCCCAGCAT TCAACAAACC TTACGCAGTA TCAAGGAGCG GCTGGGGTAG
|
|---|
| Protein sequence | MSQQTIWQNV LDYVRQNIND VEYHTWFEKI RPLGVHGGVL ELGVPTSFAG EWIKKHYAEL
IQEALTRLGA QTPRFELKVV PGNPVQEDIF SAPVQAPAPD PRSRLNPKYT FENFVVGQNN
RLAHAAAMAV AESPGKAYNP LFIYGGVGLG KTHLMHAVGH SVAARFPSLR IEYVSTETFT
NELINAIRED RMTEFRERYR SVDLLLVDDI QFVAGKERTQ EEFFHTFNAL YEAHKQIILS
SDRPPKDILT LEARLRSRFE WGLITDIQPP ELETRIAILK MNSEYRSMRI PEEVLEYIAR
QVTSNIRELE GALMRVIAYA SLNGVEITKN VAARALSDVF TARETDFSPD DILRAVADHY
GLRTDELKGA GRRKEVVIPR QIAMFLIREL TQSSLPEIGQ FFDGRDHTTV LYAIQKVQEL
ADSDPSIQQT LRSIKERLG
|
|---|
| |