| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2482 |
|---|
| Symbol | |
|---|
| ID | 4848145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 2461069 |
|---|
| End bp | 2461785 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640117192 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001048385 |
|---|
| Protein GI | 126180420 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.988214 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGAGG CAACCGAACT CACGAAGAAC TACGGCAACG TCACCGCGGT GAACAGGGTA
TCGTTCTCCG TTGCGGAAGG GGAGCTCTTC GGCCTGCTCG GGCCGAACGG CTCGGGGAAG
ACGACGATGA TCCGGATGCT GACCGGGCAG ATTCCGCCGA CCTCCGGGTC GGCCCGGGTG
ATGGGGCTCG ATGCGGCGAA GGATCCCATC GGGGTCCGGG GGCTCGTCGG GATCATCCCC
GAACAGGAGA CGCCGCCGAG TTTCCTCACC GCGGAGGAGT ACCTCCGTTT CGTGGCCAGC
ATCCGAAACC TCGACTCGGT GGACGAGCGG TGCGACCGCT GGTTCGACCT GCTGGAGTTT
GGCGACAAGC GGGACGTCCT CTGCAAGGAT CTCTCCCGGG GCACCCGGCA GAAACTGATG
TTTGCGCAGG CGTTCCTCCA CGAACCAGAG CTCGCCCTCA TCGACGAGCC GCTGATCAAC
CTGGACCCCA TCATGCAGCG GACGGTCAAA GACTTCCTGC GCGAGTATGT CCAGGGCGGC
GGGACCGTCT TCTTCTCCAC CCATATCCTC GAGATCGCCG AAGAGATCTG CGACCGTATC
GGGGTCATCC ACAACGGCAG GATCCTTCAC TCCGGCCCGG TCGAAGACCT CGTCGGATCG
GGCCGGCACC TCGAGTCCTT CTTCCTCGAC CTGGTCAAGG GTGATGCCGG TGCCTGA
|
|---|
| Protein sequence | MIEATELTKN YGNVTAVNRV SFSVAEGELF GLLGPNGSGK TTMIRMLTGQ IPPTSGSARV
MGLDAAKDPI GVRGLVGIIP EQETPPSFLT AEEYLRFVAS IRNLDSVDER CDRWFDLLEF
GDKRDVLCKD LSRGTRQKLM FAQAFLHEPE LALIDEPLIN LDPIMQRTVK DFLREYVQGG
GTVFFSTHIL EIAEEICDRI GVIHNGRILH SGPVEDLVGS GRHLESFFLD LVKGDAGA
|
|---|
| |