Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2460 |
Symbol | |
ID | 4846379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 2437913 |
End bp | 2438917 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640117170 |
Product | hypothetical protein |
Protein accession | YP_001048363 |
Protein GI | 126180398 |
COG category | [R] General function prediction only |
COG ID | [COG3889] Predicted solute binding protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACCAG AGTGGATCCG CAGGCGAGGC CTCGTCATCC TCCTCGCCAT CTGCATCATT GCCCTTTGTG TGGGGCAGGC CGGAGCCCGC GGCCCGACGA TCCGCGATAT CCAGCCTTAT GACACGATCT TTATCTACGA AGAGGGGCTC GACCTCTCGC AGCTGAGGAA CGCGACCACG GATAACCCCG TCACGGAACT GCGGCGATAC CAGGACGACA ACCCCGACCG GGGGGTCACG AGGAGCATCC CGGTCGCCGA CGACACCAAC TTTGAAGTGC AGGAGATCTA CCTGCAGGAG GACTACGGGA CATACTACGC CTACAACCCC GAGGACGGGA CGTCGGCGCA GGTCATGATC CGCGAACCGA GGCTCTTCCT CGACGTGGTG CTCGCGAACC CCCACCACAA CGAACCCCTG GAAGGGCTGA CCGTCTCCCC GAACACCCGG ATCGCGTTCA GGGTGTCCTC TCCCGACGTC GGGGCGTTCT ACCAGGCGGG CGGCGTCTAC CCGGCGACGA TTGATATCGT GCTCACCACA CCGGGCGGCG CCGAGACCAC CGTCATCGGA GGACGCAACT TCGCGGGGTT AAACGTCAGT TCGACCCGGT TCTACACCGA CGACCCCGGC TGGCCGGGCG CAGTCCGGCT CGGCGACCTC GGTGAGCCGG GGACCTACTC CGTCAGGGCA GTATGGAGGA CGCCTTCGGG GTTCGACGCC TACGCTCCAG ACTCCGAGCG GGTGACGTTC GCGGTAGCAA ACCGCGTCGG GGTGGATACG ACCGCGACGC CGACGCCCAC CGCAACCGTG ACGGCCACGC CGACGGCAAC ACCAACGGAG ATGACCGTGC CCACGACCGA ACCAACGGCA ACGGAGACGG CAACACCGGT CACAACCGCG ACGACGGAGC CGACGACCCC GACACCGACC GCAGCGCCGC TCCCGGCCGC CCTGGCCGTA GCAGCGGCCG GGTTCGTCCT GACGCTCGCC GGCAGGCGAA GGTAA
|
Protein sequence | MAPEWIRRRG LVILLAICII ALCVGQAGAR GPTIRDIQPY DTIFIYEEGL DLSQLRNATT DNPVTELRRY QDDNPDRGVT RSIPVADDTN FEVQEIYLQE DYGTYYAYNP EDGTSAQVMI REPRLFLDVV LANPHHNEPL EGLTVSPNTR IAFRVSSPDV GAFYQAGGVY PATIDIVLTT PGGAETTVIG GRNFAGLNVS STRFYTDDPG WPGAVRLGDL GEPGTYSVRA VWRTPSGFDA YAPDSERVTF AVANRVGVDT TATPTPTATV TATPTATPTE MTVPTTEPTA TETATPVTTA TTEPTTPTPT AAPLPAALAV AAAGFVLTLA GRRR
|
| |