Gene Memar_2460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2460 
Symbol 
ID4846379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2437913 
End bp2438917 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID640117170 
Producthypothetical protein 
Protein accessionYP_001048363 
Protein GI126180398 
COG category[R] General function prediction only 
COG ID[COG3889] Predicted solute binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCAG AGTGGATCCG CAGGCGAGGC CTCGTCATCC TCCTCGCCAT CTGCATCATT 
GCCCTTTGTG TGGGGCAGGC CGGAGCCCGC GGCCCGACGA TCCGCGATAT CCAGCCTTAT
GACACGATCT TTATCTACGA AGAGGGGCTC GACCTCTCGC AGCTGAGGAA CGCGACCACG
GATAACCCCG TCACGGAACT GCGGCGATAC CAGGACGACA ACCCCGACCG GGGGGTCACG
AGGAGCATCC CGGTCGCCGA CGACACCAAC TTTGAAGTGC AGGAGATCTA CCTGCAGGAG
GACTACGGGA CATACTACGC CTACAACCCC GAGGACGGGA CGTCGGCGCA GGTCATGATC
CGCGAACCGA GGCTCTTCCT CGACGTGGTG CTCGCGAACC CCCACCACAA CGAACCCCTG
GAAGGGCTGA CCGTCTCCCC GAACACCCGG ATCGCGTTCA GGGTGTCCTC TCCCGACGTC
GGGGCGTTCT ACCAGGCGGG CGGCGTCTAC CCGGCGACGA TTGATATCGT GCTCACCACA
CCGGGCGGCG CCGAGACCAC CGTCATCGGA GGACGCAACT TCGCGGGGTT AAACGTCAGT
TCGACCCGGT TCTACACCGA CGACCCCGGC TGGCCGGGCG CAGTCCGGCT CGGCGACCTC
GGTGAGCCGG GGACCTACTC CGTCAGGGCA GTATGGAGGA CGCCTTCGGG GTTCGACGCC
TACGCTCCAG ACTCCGAGCG GGTGACGTTC GCGGTAGCAA ACCGCGTCGG GGTGGATACG
ACCGCGACGC CGACGCCCAC CGCAACCGTG ACGGCCACGC CGACGGCAAC ACCAACGGAG
ATGACCGTGC CCACGACCGA ACCAACGGCA ACGGAGACGG CAACACCGGT CACAACCGCG
ACGACGGAGC CGACGACCCC GACACCGACC GCAGCGCCGC TCCCGGCCGC CCTGGCCGTA
GCAGCGGCCG GGTTCGTCCT GACGCTCGCC GGCAGGCGAA GGTAA
 
Protein sequence
MAPEWIRRRG LVILLAICII ALCVGQAGAR GPTIRDIQPY DTIFIYEEGL DLSQLRNATT 
DNPVTELRRY QDDNPDRGVT RSIPVADDTN FEVQEIYLQE DYGTYYAYNP EDGTSAQVMI
REPRLFLDVV LANPHHNEPL EGLTVSPNTR IAFRVSSPDV GAFYQAGGVY PATIDIVLTT
PGGAETTVIG GRNFAGLNVS STRFYTDDPG WPGAVRLGDL GEPGTYSVRA VWRTPSGFDA
YAPDSERVTF AVANRVGVDT TATPTPTATV TATPTATPTE MTVPTTEPTA TETATPVTTA
TTEPTTPTPT AAPLPAALAV AAAGFVLTLA GRRR