Gene Memar_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_2420 
Symbol 
ID4846378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp2400118 
End bp2400597 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content64% 
IMG OID640117128 
Productblue (type1) copper domain-containing protein 
Protein accessionYP_001048323 
Protein GI126180358 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTGAGTA GAGGGAGCCT CCCTCTCCTT TTTAGAGCGT GGTCGCCGCA CCGGGGGGTT 
GCTATAGCGC AGGCAAGACA ACCTTTATGC CTCCCGGCCG CCTGGAGGGG GACTCATGGC
ACGAATAACC GTAGTCATGG CGTCCGGTAC GGGGGTGCGG GCGTGACCCC GGAAGCGGCC
CGCGTCGTCG CGAGGGTGAC CGTCGCAATC GCGGCCGAGA ACTTCGGCTT CAGTACGGAG
ACAATAACGG TCCCCGCAGG CGCGGAGGTG ACGATCGAGT TCGACAACCG GGATGACGGG
GTTCCGCACA ACGTCGCGGT CTACACGGAC TCCTCAGCAA GCGATGCGAT CTTCGTCGGC
GAGATCGTCA TGGGCCCCAC CCGCGCCACC TACACCCTCA CGGCGCCCGA GACCCCGGGA
AACTACTTCT TCCGGTGTGA CGTCCATCCT GCGATGCACG GGGCGTTCAT CGTGACGTAG
 
Protein sequence
MLSRGSLPLL FRAWSPHRGV AIAQARQPLC LPAAWRGTHG TNNRSHGVRY GGAGVTPEAA 
RVVARVTVAI AAENFGFSTE TITVPAGAEV TIEFDNRDDG VPHNVAVYTD SSASDAIFVG
EIVMGPTRAT YTLTAPETPG NYFFRCDVHP AMHGAFIVT