Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_2420 |
Symbol | |
ID | 4846378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 2400118 |
End bp | 2400597 |
Gene Length | 480 bp |
Protein Length | 159 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640117128 |
Product | blue (type1) copper domain-containing protein |
Protein accession | YP_001048323 |
Protein GI | 126180358 |
COG category | [C] Energy production and conversion |
COG ID | [COG3794] Plastocyanin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTGAGTA GAGGGAGCCT CCCTCTCCTT TTTAGAGCGT GGTCGCCGCA CCGGGGGGTT GCTATAGCGC AGGCAAGACA ACCTTTATGC CTCCCGGCCG CCTGGAGGGG GACTCATGGC ACGAATAACC GTAGTCATGG CGTCCGGTAC GGGGGTGCGG GCGTGACCCC GGAAGCGGCC CGCGTCGTCG CGAGGGTGAC CGTCGCAATC GCGGCCGAGA ACTTCGGCTT CAGTACGGAG ACAATAACGG TCCCCGCAGG CGCGGAGGTG ACGATCGAGT TCGACAACCG GGATGACGGG GTTCCGCACA ACGTCGCGGT CTACACGGAC TCCTCAGCAA GCGATGCGAT CTTCGTCGGC GAGATCGTCA TGGGCCCCAC CCGCGCCACC TACACCCTCA CGGCGCCCGA GACCCCGGGA AACTACTTCT TCCGGTGTGA CGTCCATCCT GCGATGCACG GGGCGTTCAT CGTGACGTAG
|
Protein sequence | MLSRGSLPLL FRAWSPHRGV AIAQARQPLC LPAAWRGTHG TNNRSHGVRY GGAGVTPEAA RVVARVTVAI AAENFGFSTE TITVPAGAEV TIEFDNRDDG VPHNVAVYTD SSASDAIFVG EIVMGPTRAT YTLTAPETPG NYFFRCDVHP AMHGAFIVT
|
| |