| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2408 |
|---|
| Symbol | |
|---|
| ID | 4846435 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 2391658 |
|---|
| End bp | 2392581 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640117118 |
|---|
| Product | UbiA prenyltransferase |
|---|
| Protein accession | YP_001048313 |
|---|
| Protein GI | 126180348 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACACCC GTTCCCTCCG CGAGTTCATC CGGCTCGGCC GGTTCCCCTT CCTCCTCTCG
GGCTTTATCC CGTTCACCGC CGGGGCGCTC CTCGCGTTCC TCCTCGGGGC GCGGTTCACC
CCGGCCCAGT TCCTTATCGG CTACGCGGCC ATGGCGGCGG CGCACCTCTC CGTCCACTAC
AGCAACGACT ACTTCGACGC CGACGCCGAC CGGTTCGTCG AGACGACGCC GATATCCGGG
GGGAGCGGCG TCCTTGCCGC CAACCCGGAC CTGAAACCCG TTGCGTTCCG GGCGGCCGTC
GCCCTGATGG CGGTCTCGGT CCTGATCGGG TATTTCTTCG TGACTGTCTA CGCCTACCCG
GTTGTCTTCC TGGTCTTCGG CATCGCGGGC AACCTGCTCG GCTGGTTCTA CACGGCGCCG
CCGCTCGCCT TCGCCTACCA TAACCTCGGC GAGGTCACGA ACATGATCAC CTTCGGCCTC
CTGATGCCGG GGGCGGGCTA CTTCGTCGCG ATGGGAACGC TTGATGCCGC CTTCTTTGCC
TTTGCCGTTC CGCTCTGCCT TTACGGGCTC GTCTTCATCA CGAGCGTCGA GATCCCGGAC
AGGGAAGGCG ACATCGCCGG GGGCAAGCGG ACGCTCGTCG TCCGGAAAGG CCGCGTCTTC
GGGTTCTGGC TCATCGCCCT CGCGGCGACC CTCGCGACCG CGTCGCTCGC CGTTTTCGCC
CTCACCGATT TCTTCGCGCC CGTGGACTTT TGGCCGGTCG CGCTCGTATC CCTCATCCCG
CTCGGGATTG CTCTGTGGGG GTTCTTGCAC CGGTGCGCCG GACGGGCGTG TACCCTTCCC
TTCGCAGTCG CGAATATCGT GGGTTACTTC CTCTTCCAGG GGCTTGTCGT CATCTATTTC
ATCTACGCGG CCGTTTCGGC CTGA
|
|---|
| Protein sequence | MDTRSLREFI RLGRFPFLLS GFIPFTAGAL LAFLLGARFT PAQFLIGYAA MAAAHLSVHY
SNDYFDADAD RFVETTPISG GSGVLAANPD LKPVAFRAAV ALMAVSVLIG YFFVTVYAYP
VVFLVFGIAG NLLGWFYTAP PLAFAYHNLG EVTNMITFGL LMPGAGYFVA MGTLDAAFFA
FAVPLCLYGL VFITSVEIPD REGDIAGGKR TLVVRKGRVF GFWLIALAAT LATASLAVFA
LTDFFAPVDF WPVALVSLIP LGIALWGFLH RCAGRACTLP FAVANIVGYF LFQGLVVIYF
IYAAVSA
|
|---|
| |