| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_2175 |
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| Symbol | |
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| ID | 4848136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 2169604 |
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| End bp | 2170164 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640116883 |
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| Product | hydrogenase maturation protease |
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| Protein accession | YP_001048080 |
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| Protein GI | 126180115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0680] Ni,Fe-hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00072] hydrogenase maturation protease
[TIGR00130] coenzyme F420-reducing hydrogenase delta subunit (putative coenzyme F420 hydrogenase processing subunit). |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTATTCC GTGAGATCGT GATCGCAGGA TGCGGCAACC CCCTCTTTGC AGATGACGGG
TTCGGTCCTG CAGTCGTCGA GGAACTCCAG AAACTACAAC TGCCCGACAA CGTCAAGGTA
ATCGATGCCG GCCTTGGCGC CCCTCACTTC CTCTTTACCC TGATGGAAGA TGCAGAGGTG
CCGGTCAAGA AGCTGATCAT CATCGATACC GCCGACTTCG GCGCCAACCC CGGTGATGTG
ACGAAACTCC GGCCCGAAGA CCTGCCGCCG GGCACCTACC GGGATGCCCA TTCGTGGGAT
CTCTCAGAGC CGCTACAACG ATTGAAAGAC GTCATCGATA TCACGATCAT CGGGTGTCAG
CCCAAGCGTG TCGCGAGCCA TGAGTTTGAA CTGGGGCTCA CTGAGGAGGT TGAGGGTGCC
ATTCCCAAAA CAGTGCGCAT CGTGCTGGAA GAAATTGGGG TAGAATATGG GGCTACTATC
AACCATCAAG GAACGCATCT TTGGGCGTCG CCGGGAGAAA CCACCGGAGA TGCCGGGGAG
AACCCCGGAG AGAAGGTCTG A
|
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| Protein sequence | MLFREIVIAG CGNPLFADDG FGPAVVEELQ KLQLPDNVKV IDAGLGAPHF LFTLMEDAEV
PVKKLIIIDT ADFGANPGDV TKLRPEDLPP GTYRDAHSWD LSEPLQRLKD VIDITIIGCQ
PKRVASHEFE LGLTEEVEGA IPKTVRIVLE EIGVEYGATI NHQGTHLWAS PGETTGDAGE
NPGEKV
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