Gene Memar_1981 details

Gene Information

• Locus tag: Memar_1981
• ID: 4847264
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 1968703
• End bp: 1970658
• Gene Length: 1956 bp
• Protein Length: 651 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 640116687
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_001047889
• Protein GI: 126179924
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG0642] Signal transduction histidine kinase; [COG2202] FOG: PAS/PAC domain
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACCGC TCACCCCGGC GCTTGAAGAC CTCCTCGAAC ACCTGGAGGA TCTCGATCGC 
CGTCTCCGCC CGCTCAGGGC CGGCGAAGAT GCGGCTCCCA CGGGGAACCT GCTCCTGCTC 
AAACCCGTTC TTGCCGAGAT CTACGATCAG GTCGACGCGC TGATCGCCGG CATCCGGAGC 
ATCGACGCCG CATACCAACG ATATCGCGAC CGATTTTTCC ACCTCCCGGC GATTTGCCTC 
TGCACGGGCG CGGACAGCAT CGTCCTGGAG GCGAACCGGG CGGCGGCACT CCTGTTCGGC 
ATCGCTCCCG ACCGGCTGCA GGGTTCGCCT CTCGGCGCAC ATCTCCACCC GGAAAGCATC 
CCGGCGTTCC GGTCGGCCGT TGCAGCGCTC GGCCGGGGCG ATGATCTGCC TGCGCAGGAG 
TTCCTGCTCG TCCGAGCCGA CGGCGGCACC GTTCCGGCGA CTGCGGCCGT TTCGACCTCT 
TACGGGCCAG GCGGCCGTGC AGCCGAGTAC CTCTGGGTGT TCCACGACAT ATCGGGAGAG 
AAGCGAGTCG AGGAAGCCCT CCGGGAGAGC GAAGACCGGT ACCGGGAACT GACCGAGAAC 
GTCAGCGACG CATTCCTCGC CCTGGACCGG GACGGCCGCG TCCTCTCCTG GAACCGGGTG 
GCCGCCCGTC TCTCGGGCCG CACGGTGGAG GAAGCGGTCG GACAGAGCAT CTACGACCTG 
TTCCCGCAAC TCCGAAACGA CGAGGTTATC GGGTTTTTCC GGCAGATTGC GGAGACCGGC 
CGACCCGGCG TGAGCGAATG CAGGTTTGAC CTCCACGGGC GGGAGCATGC CTTCGAGGTG 
CGTGCCGTCC CCACCCGTGC GGGCGTCTCC GTCTACATCC GGGACATTAC GGCCCGGCGC 
GAGGCTGAAG TTGCCCTCCG GCGGAGCGAG GAGCGGTGCC GGATGGTCGT GGAGAGCCAG 
ACCGAGTTGA TCTGCCGCAG GCTCCCCGAC GGCACCATCA CCTTCGCGAA CGACGCCTAC 
TGCCGTTACC TCGGCATCCC GTGCGGCGAC CTCATCGGGC GGCGGTACGC CCTCACCGTC 
CCGCCCGACG ACCAGGCCCG GATCCAGGAG AGTCTCGCCT CCCTCACCCC CGATCACCCG 
GTATCGACGG TCGAGCACCG GGTGATCATG CCGGACGGCA GGGTCCGGTG GCAGCAGTGG 
ACAAACACGG CGTCCTTCGA CGACGAAGGC TCCGCCGCCG AGTACCAGTC GGTGGGCCGT 
GACATCACCG ATGCGCGGAT GGCGGGGGAG GCGCTCCTGC TTGCGAACCG GAAACTCAAC 
CTCCTCTCCG ACGTGACACG GCACGACATC TTAAACCGGC TCAACGTGCT CTCCGGCTAC 
CTCGACCTCT TCCGCGAGCG GGTGAGCGAC CCGGAGATGC TCGAGTACTG CCGGAAAGAG 
GAAGAAGCCA TCCGGGACAT CCGGCACTAC ATGGCCTTCA CCGCGGAGTA CCGGGATGTC 
GGCGTGGCCG CCCCCGCCTG GCAGGATGTC CGGCGTATCG TCCGCGAGGC GGCGGCGGGG 
CTCGACCCGG GACCGGTTGC CGTCGAGGTG CGGACGCGCG ATCTGGAGGT GTATGCCGAC 
CCGCTCATCG TCCGGGTCTT TGAAAACCTC ATCGACAACT CGCTCCGGCA CGGCGAACGG 
GTTACCCGGA TACGCATCTA TCCCGAAGAG TCCGGCCGGG GGATCAGCCT CGTCTACGAG 
GACGACGGTA TCGGCATTCC CCATGCAGCA AAAGAGAACC TCTTCGAGCG TGGGTTCGGG 
CGGCAGACCG GGTTCGGGCT CTTTCTTTCC CGGGAGATCC TCGGCATCAC CGATCTCTCC 
ATACGGGAGA CCGGCGAGCC CGGAAAGGGT GTGCGATTCG AGATCGACGT CCCGCCGGGG 
TTCTACCGCT TCACCGGTCG CGTCCAAGTT CGGTGA 

 

Protein sequence

MQPLTPALED LLEHLEDLDR RLRPLRAGED AAPTGNLLLL KPVLAEIYDQ VDALIAGIRS 
IDAAYQRYRD RFFHLPAICL CTGADSIVLE ANRAAALLFG IAPDRLQGSP LGAHLHPESI 
PAFRSAVAAL GRGDDLPAQE FLLVRADGGT VPATAAVSTS YGPGGRAAEY LWVFHDISGE 
KRVEEALRES EDRYRELTEN VSDAFLALDR DGRVLSWNRV AARLSGRTVE EAVGQSIYDL 
FPQLRNDEVI GFFRQIAETG RPGVSECRFD LHGREHAFEV RAVPTRAGVS VYIRDITARR 
EAEVALRRSE ERCRMVVESQ TELICRRLPD GTITFANDAY CRYLGIPCGD LIGRRYALTV 
PPDDQARIQE SLASLTPDHP VSTVEHRVIM PDGRVRWQQW TNTASFDDEG SAAEYQSVGR 
DITDARMAGE ALLLANRKLN LLSDVTRHDI LNRLNVLSGY LDLFRERVSD PEMLEYCRKE 
EEAIRDIRHY MAFTAEYRDV GVAAPAWQDV RRIVREAAAG LDPGPVAVEV RTRDLEVYAD 
PLIVRVFENL IDNSLRHGER VTRIRIYPEE SGRGISLVYE DDGIGIPHAA KENLFERGFG 
RQTGFGLFLS REILGITDLS IRETGEPGKG VRFEIDVPPG FYRFTGRVQV R