| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1979 |
|---|
| Symbol | |
|---|
| ID | 4848449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1967315 |
|---|
| End bp | 1968559 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640116685 |
|---|
| Product | exodeoxyribonuclease VII, large subunit |
|---|
| Protein accession | YP_001047887 |
|---|
| Protein GI | 126179922 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1570] Exonuclease VII, large subunit |
|---|
| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.337025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGGCG GTCATTCCAC CGGCCCGGAA CGGTTCGGCA CCCCGATATT CGGGGTCTCG
GAGGTCTCGG GGCTCATCTG CGACCTCCTC GACGACGCCC GCCTGCGCCG GATCTGGGTG
CGGGGGGAGG TGACCAACTA CAAGAACCAC GCCTCCGGCC ACCGTTATTT CTCACTCTCC
GAGCGAAACG GAAGAAGTTC CGCGGTGATC AACTGCGTCA TGTGGCGCAC CTCCGCTTCA
ACGCTCGCGT TCGCGCCCAA AGACGGCATG GACGTCCTCG CCTGGGGCTC CGTGGAGGTC
TACGAGCCTC ACGGCAGGTA CCAGCTGATC GTCCGGGAGA TGCTCCCGGC TGGCCTCGGC
GAACGCCACC TCATGGTCGA GCGCTGGAAA CAGGAACTCG ACGCCGAAGG GCTCTTCGAT
CCCGGGCGGA AACGGCCTCT GCCCCTTTTC CCGCAGCGGA TCGGCGTGGT CACCTCACCG
ACCGGCGCGG CGGTGAAGGA TATCCTCTCG GTCATCTCCC GGCGGTATCC GGCGGACGTT
ATCCTCTCCC CGACGGCGGT CCAGGGTGAG GGGGCGCACG TCGAGATCGC GGAGGCGATC
CGGCGGATCG ACGGGCTCGC GGACGTGATC ATCGTCGGGC GCGGCGGGGG GAGTTTCGAG
GATCTCTTCG CTTTCAACCA CCCGGACGTC GTGCGGGCGG TCGCGGCGTG CAGGACGCCC
GTGATCAGCG CCGTCGGGCA CGAGGTGGAC ACCGCCCTCT GCGACTTCGC CGCGGACCTC
CGGGCGCCGA CGCCGTCCGC GGCGGCGGAA CGGGCGGTTC CGGAACGCCG GGAGGTGCTC
CGGGAACTTG CCGGGTGCGA GGAGAGGATG CACCTGCTCG TCCATAGCCG CCTCGCCGCT
TCACAGAGCG AGGTCGAGGA ACTCCGGGAG CGCATGCGCC CCGGACGGCT CGCGCGCCGC
ATCAACGAGC GGATGCAGCG CCTCGCCGAA CACGACGACC TGCTCCGGCG GGCGGCGGTC
GCCCGGGTGC AGCGGGAACG CTCCGCCCTC GCGGAGCTCC GCGCCAACCT CGAAGGAAAG
AACCCTCTCG CCATCCTGGA GCGGGGATAC TGCATCGTCG AGGCGGGCGG CAGGGTCGTG
AGGAGCGCCG CGAGCCTCGC ACCGGGCGAG CGCGTGACGA TCAGGATGAT GGACGGCCGG
GCAGTCGCCG TCGTGGAGGA GACAACGTAT GACGAAAACC TTTGA
|
|---|
| Protein sequence | MLGGHSTGPE RFGTPIFGVS EVSGLICDLL DDARLRRIWV RGEVTNYKNH ASGHRYFSLS
ERNGRSSAVI NCVMWRTSAS TLAFAPKDGM DVLAWGSVEV YEPHGRYQLI VREMLPAGLG
ERHLMVERWK QELDAEGLFD PGRKRPLPLF PQRIGVVTSP TGAAVKDILS VISRRYPADV
ILSPTAVQGE GAHVEIAEAI RRIDGLADVI IVGRGGGSFE DLFAFNHPDV VRAVAACRTP
VISAVGHEVD TALCDFAADL RAPTPSAAAE RAVPERREVL RELAGCEERM HLLVHSRLAA
SQSEVEELRE RMRPGRLARR INERMQRLAE HDDLLRRAAV ARVQRERSAL AELRANLEGK
NPLAILERGY CIVEAGGRVV RSAASLAPGE RVTIRMMDGR AVAVVEETTY DENL
|
|---|
| |