Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1977 |
Symbol | |
ID | 4848301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1965072 |
End bp | 1966352 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640116683 |
Product | hypothetical protein |
Protein accession | YP_001047885 |
Protein GI | 126179920 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.890218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTAGTCG TAGACCTTCT AACTATAGAG ATCATTTTAT TCGTTGTTTG TCTGCTCCTT TCGGGCTTCT TCTCGAGTTC GGAAGTCGCC CTCATATCGA TAACCCGGGC GAAAGTCCGC GCCCTCTTAA ATCAGGGTCG AAAGGGAGCG AAAGCACTCG ATACACTGAA GAAATCGACC GACGGCCTCC TGATCACCAT CCTGATCGGG AACAACATCG TCAACGTGGC CGCGGCATCG CTCGCGACCG CGATCGCGAT CGCCATCTAC GGCGACGTCG GTATCGGGAT AGCGACCGGG GTTACGGTCA TCCTGATGCT GGTCTTCGGC GAGATCGGGC CGAAGATGTA TGCCTCCCGG AATACCGAGA CACTCGCGCT CCGCGTCGCC CTGCCGATCC TCTACCTCTC GAGAGTGCTC TACCCGGTGC TCTGGGTCGC TGACCGCATC AAGCGGCAGT TCGCCTTCAG GCCCGGCGTG ACCGAGCCGG TCGTCACCGA GGAGGAGATC AAGGAATGGA TCGACGTCGG CGAGGAGGAG GGCACCATCG AGGAGGAGGA GCGGGACATG CTCTACTCCG TACTGCGCTT TGGAGACACG ACGGTTCGCG AGGTGATGAC GCCGCGAATA GACGTCGTCA TGATCGAGGA CGCATCCACG CTCGAGAACG CCCTCTCCAT CTTCAACGAG ACGGGTTTCT CCCGGATCCC GGTCTACCAC GAGCATATCG ACAACGTCGT CGGGCTCCTG AACGTGAAAG ACGTCTTCTC GGCGGCCTTC CGCCAGCAGA CGAGCGCGAC GATCCCGAGC CTGATGTACG AACCCTACTT CGTTCCCGAG AGCAAGAAGA TCGACGAGCT CTTAAAGGAA CTTCAGGTGA AGAAGCAGCA CATGGCGGTC GTCCTCGACG AGTACGGGTC GTTTGCCGGG ATCGTGACCG TCGAAGACAT GCTCGAAGAA CTGGTCGGCG AGATCATGGA CGAGTTCGAC GAGGAGGAGC CCGAGGTGCA GCAGGTCGAG GAGGGTGTCT ACCTGGTCGA TGCGCGGGCG TGGGTGGAGC ACCTCAACGA GGACCTGGAG TTATTCCTTC CGCTGACGGA TGCCTACGAG AGCATCGGCG GCCTCGTCAT CGACCGGCTG GGACATATCC CCCGCCGCGG CGAGGTGGTC AAGATCGAGG AGAGCAACAT CACGCTGGTG GTGATGCAGA TGCGGGGCCG GCGGATCGTC AAGGTGAAAC TGATCATCGC GTCTCAGAAC GCGCCGGGCG AGGCCCGGTA A
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Protein sequence | MVVVDLLTIE IILFVVCLLL SGFFSSSEVA LISITRAKVR ALLNQGRKGA KALDTLKKST DGLLITILIG NNIVNVAAAS LATAIAIAIY GDVGIGIATG VTVILMLVFG EIGPKMYASR NTETLALRVA LPILYLSRVL YPVLWVADRI KRQFAFRPGV TEPVVTEEEI KEWIDVGEEE GTIEEEERDM LYSVLRFGDT TVREVMTPRI DVVMIEDAST LENALSIFNE TGFSRIPVYH EHIDNVVGLL NVKDVFSAAF RQQTSATIPS LMYEPYFVPE SKKIDELLKE LQVKKQHMAV VLDEYGSFAG IVTVEDMLEE LVGEIMDEFD EEEPEVQQVE EGVYLVDARA WVEHLNEDLE LFLPLTDAYE SIGGLVIDRL GHIPRRGEVV KIEESNITLV VMQMRGRRIV KVKLIIASQN APGEAR
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