| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1948 |
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| Symbol | |
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| ID | 4847795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1942347 |
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| End bp | 1942838 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640116654 |
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| Product | 3-isopropylmalate dehydratase, small subunit |
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| Protein accession | YP_001047856 |
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| Protein GI | 126179891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.353439 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGAGTCT GGAAGTTCGG CGACGATATC GATACGGATG CGATCATCCC CGGGCGGTTC
CTCACCATCT ACGACCCGGG GGAACTTGCG AAGCACGCGT TCGAGGGGAC TCGGGACGAG
TTCGCGAAGG AGGCGCGGGA GGGCGACGTC GTGGTCGGAG GCAGCAACTT CGGGTGCGGC
TCCTCCCGCG AGCACGCGCC GCTCGCGCTC CTCGGCGCCG GGGTGAAGGT CGTGGTCGCG
AAGTCCTTTG CGCGGATCTT CTACCGGAAC GCCGTGAACA CGGGTCTCCT GCCCCTGGTC
TCTGCCGGGG CGGAGAGCAT CCGGGACGGC GATGCCGTCA CGGTGAACCT CGCCGGAGGC
TACATCGAGG CGAACGGGAG ACGGCTCGCC GTCGAGCCGG TTCCCGGGTT CATGAAGGAG
ATCGTCGATG CCGGCGGCCT TGTCGCCTAC GCAAAAGACC TGGATGAGGT GAAGACATGC
AGCACCGAGT AG
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| Protein sequence | MRVWKFGDDI DTDAIIPGRF LTIYDPGELA KHAFEGTRDE FAKEAREGDV VVGGSNFGCG
SSREHAPLAL LGAGVKVVVA KSFARIFYRN AVNTGLLPLV SAGAESIRDG DAVTVNLAGG
YIEANGRRLA VEPVPGFMKE IVDAGGLVAY AKDLDEVKTC STE
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