Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1916 |
Symbol | |
ID | 4847109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1911235 |
End bp | 1912527 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640116622 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_001047824 |
Protein GI | 126179859 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCCTCC CCTCGCACCT CACGGTCAGG GACGGCCATC TCCGGATCGG CGAGCACGAC ACGGTGGATC TCGCGGAACG GTTCGGCACC CCGCTTTACG TCACCGACGA GATGCGGATC CGCGGGAACT TCCAGAGGCT TTCGGGCGCG CTCACCGCCC ACTACCCCAA AATCCGTGTC CTCTACGCCG CGAAGGCAAA CGGCAACCTG GCGATCTTTA AGACGCTCGC ATCACAGGGC GCCGGGGCCG ACGTCTTCTC TGCGGGAGAG GTCGCGCTCG CCCTCGCCGC CGGGATGCTT CCTTCGTCGC TCCTCTTCAA CGGGAGCTCG AAGACCCCCG CCGACCTCGC CCTCGCGGTC GAGAAGGGCA TCCGGGTCTC GGTGGACTCA CCAGACGAAC TCCGGCAGCT CGACCGCGCG GCGGGAGCGG CGGGAACAAC CGTCGAGATC GCGTTCAGGG TCAACCCGGC AATCGAGGTC CCCACCCACC CGAAGATCGC GACGGGGCTT GCGACGAGCA AGTTCGGTAT TCCCGCAGGG CAGATCCTGG ATGCCTACAG GGAAGCGCTC GCGCTCGAGC ACGTAAAACC GGTCGGGATC CACTGCCACA TCGGCTCGCA GATCCTCGAC GTGGAGCCCT TCGCCCACGA GGTTGAGGTG CTGATCGACG TCGCCCGCGA TCTCCTCGAT ATCGGGGTCA ACCTCTCGTT CATCGATATC GGGGGCGGCC TCGGCATCCC CTACCACCGG GAGACCGATC GCGCCCCGAC GCCGGAGGAG TACGCGGAAG CGGTCATGCC GGTCTTCCTT CGCGGCATCA AAGAACTCGG GATCGAGCCC GAACTCTGGG TCGAGCCGGG CCGGTGGCTC ATCGGCGACT CGACGGTCCT CTTGACAAGG GTCAACTCCG TCAAGACCGC CCATAAGACC TTCGCGAACG TCGACGCCGG GTTCAACCTT CTCGTCCGGC CGACGATGTA CGATTCTTAC CACGAGGTCG TGGCGGCGAA CAGGGCCGAC GCGCCCGCCG TGCGGGAGTA CTCCGTCACG GGGCCGATCT GCGAGACCGG CGACATCCTC GCGAAAGACC GGATGCTCCC CGAACTCGAG GCAGGCGATC TCATCGCGGT GCTGGACGCC GGGGCCTACG GGTTTGCGAT GTCGTCGCAG TACAACAGCC GGCCCCGCTG CGCCGAGGTG CTCCTCGCGG GCGAGAAGGC GGCGCTGATG CGCCGGGCCG AGACGATCGA CGACCTGACC GCCCCCATGG TGACGGTGCC CTGGCAGGAG TAA
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Protein sequence | MILPSHLTVR DGHLRIGEHD TVDLAERFGT PLYVTDEMRI RGNFQRLSGA LTAHYPKIRV LYAAKANGNL AIFKTLASQG AGADVFSAGE VALALAAGML PSSLLFNGSS KTPADLALAV EKGIRVSVDS PDELRQLDRA AGAAGTTVEI AFRVNPAIEV PTHPKIATGL ATSKFGIPAG QILDAYREAL ALEHVKPVGI HCHIGSQILD VEPFAHEVEV LIDVARDLLD IGVNLSFIDI GGGLGIPYHR ETDRAPTPEE YAEAVMPVFL RGIKELGIEP ELWVEPGRWL IGDSTVLLTR VNSVKTAHKT FANVDAGFNL LVRPTMYDSY HEVVAANRAD APAVREYSVT GPICETGDIL AKDRMLPELE AGDLIAVLDA GAYGFAMSSQ YNSRPRCAEV LLAGEKAALM RRAETIDDLT APMVTVPWQE
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