Gene Memar_1868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1868 
Symbol 
ID4847166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1861573 
End bp1864185 
Gene Length2613 bp 
Protein Length870 aa 
Translation table11 
GC content67% 
IMG OID640116574 
ProductCna B domain-containing protein 
Protein accessionYP_001047776 
Protein GI126179811 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGCG GCACCTGTTT CTGGATCGTC CTGCTCTCGG CACTCGCGCT TGTCGTGGGT 
GCGGGGGCAC AGACGGGAGA TCCTGCGGTT ATCTGGAACC GGACGTATGG AGGACCTGAC
ACATACGACG CGGCCTACGC GGCCGTTCCC GACCCCGGCG GAACCGGGCT ATTCCTTGCC
GGGGAGACGG CGTCGTTCGG TGCGAAGACG GACGCCTGGG TGATCCGGCT CGCGCCGGAC
GGGGGCGAGG AGTGGAACAG AACATACGGC GGGGAGGAGG CCGACGCTGC GCATTCCATC
ATCAGAACCA ATAGCAGCAA CCTCCTCTTC GCCGGGAACC TCACCCTGGT CACGAACGGG
ACAGAGGCGG ACACCGATGC CTGGCTCGTG GAGATAGACC CCTCCGGCGG CGAGGTCTGG
AACCGGACGT ACGGCGGCCC TGACGTCAAC GCCACGGCCG CCGCGGTTAT CGAGGCGGAG
GACGGAGGCT ACGTCTTCGT CGGCTCCATC ACGCCGCGGG AAGGGAATGA ATCATCGGCC
TGGGCGGTCA GGGTAAACGA GGTGGGTGAT GAGACCTGGA ACCGGACGTT CGGCGGAGCC
GGGGAGAATG CCGCGAACGC CGTCACCCGG ATCCCCGGTG GGGACTTCGT CGTTGCCGGC
AGCACCGGGT CCTCGGGAGC GGGCATGGCC GACGTCTGGG TGGTCCGGCT GGACGGGTCC
GGTGGCGAGG TCTGGAACAG GACGTTCGGC AGCCCCGACG ACGATGCCGG TCGGGCGGTG
ATCAACACCT CCGACGGTAA CCTGCTCGTC GCCGGCACGT TCACGGAGCG GCCGGACAAC
ACGACGGTCG ATACCGACGC CCTCCTCATC AAGCTCACGC CCGACGGGGA TATCGTCTGG
AACTGGATCT ACGGCGACTT CGGCGTGAAC GAGACGGCGG CGGCCGTCAT CGAGACTCCG
GACGGCGGCT ACCTCTTCGC CGGGGAGACG GCTTACCCCG GGGTGGACGA TACCGACGCC
TGGCTGGTCG CGACCGACGC TGACGGGGCG GTGGCGTGGA GCCGGACGTT CGGCGGTATA
AACTCCGACG ATGCGGCCGC ATCGCTCATC GAGTCCGCAC CGGGTGAGTT CGTCTTCGCA
GGGATGTTCA ACGCCACGGT GAGCGGAGGG ACGGCGAATA TGGATGCCTG GGCGGTGAAA
CTGGGGCCGG AGCCCACGCC GACGCCGACA CCGACCGCTA CCCCGACTGC TACCCCGACG
CCCGTGCCCA CGGCGACACC TTCCAAGCCC TCGAAAGCAC CGATAATCTC CCAGAAACCC
CCGGTACCAA CCGAAACGAT GACTGCCGCC CCGTCACCGG CTATGACGGT TCCGACGGGA
ACCACCTCAC TGTCTCCAAC AGCGGCTCCT ACGGCGCCCT CCTCGCCCGG ACCCACCTGG
ACGACGACGC CCACGGCCGC GCCGACGGTG ACGGGCGCAC CGTCACCGAC CATGACGGCC
GGGCCGTCTC CGACCATGAC GCCGGTCGGC AACGACGACG ATGACGATGA TGACAATGAC
GACGGCAATA ACCAGACCGG CGGCGCGGCA AACGAATCGC TCTCGGGGAC GGTCTGGTTC
GACCTGAACG GTGACGGCGC CCGCGATCCC GGCGAGCCGG GTATCCCCGA GATCAGCGTG
CGGCTGATCG GCCAGCGAAC CATGATGGAC TATACCACCA CCGGCCCGGA CGGGTCATAC
CGGTTTGGGG CCATCCCCTC CATCGGTTAC GCCGGTGTTG AGTTCATTCT CCCGGACGGG
TATTCCTGCA CCGTCCCGGG CCTGGACAAC CATGCCGCAC CTCTCGGCAC GGACGTGATA
TTCGCCGAAG GCGGGGTCGA CCGGCAGACC CTGAATGCGG GGCTCGTCGG AGATCTCCTG
CCCGGAACCC CGGCAGCGTC CTACGGGTGG GTGCTCGGGA CGGTCTGGAG CGACGATAGC
CGGGACGGTA TCAACGACGA GGCCTACGGC CTGACGGACG TCGAGGTCCG CCTCCTGGAC
GCGGGCGGGA ACGTGGCGGG ATCGACCCGA ACCAGGTATC ACGACAGTCA CTTCTCCATG
TATCTCTTCG GCCCGCTCCC GCCCGGGGAA TACTCCGTCG CGTTCACTGC GCCGGAAGGT
TACGTCTTCA CGAGTCCCGG CCGGGACAGC TACGCCGACC CCTCGACCGG GGCGACCGGC
CCGTTTACGG TCGGCGGGGG GGAAGCGGTC GTCAGGGGTG CGGGGCTGTT CCTCTCCCCC
GCCCCGATCC CCTCGCCCGG TGAGCCGGAG ATTAAGCCCT CAGTTGAGAA CGGGACGGAC
GATGAGCAGG AGCAGCGGGA CGATGTGGCT GATGGCGAGG ACTCTGAGCC GGGCGGGCCG
GCCGTGACCG ACGGCCCGGA GGCTCCGGTG AACGAGACCG CCGACGACGG CGATGCCGCC
GGCGAGCGGG AACCCGTGTG GAAGATCGGT GACGATTGGG ACGAGGTTAG AGACAACGAC
GACCGGAAAG AGATTAAAGA CGATGACCGG GAGAAAGCGG ATGAGGTGGG AGAGAGCGAC
CGGCGTGACG ACGGCAGGGA CGAGGATGAT TGA
 
Protein sequence
MRRGTCFWIV LLSALALVVG AGAQTGDPAV IWNRTYGGPD TYDAAYAAVP DPGGTGLFLA 
GETASFGAKT DAWVIRLAPD GGEEWNRTYG GEEADAAHSI IRTNSSNLLF AGNLTLVTNG
TEADTDAWLV EIDPSGGEVW NRTYGGPDVN ATAAAVIEAE DGGYVFVGSI TPREGNESSA
WAVRVNEVGD ETWNRTFGGA GENAANAVTR IPGGDFVVAG STGSSGAGMA DVWVVRLDGS
GGEVWNRTFG SPDDDAGRAV INTSDGNLLV AGTFTERPDN TTVDTDALLI KLTPDGDIVW
NWIYGDFGVN ETAAAVIETP DGGYLFAGET AYPGVDDTDA WLVATDADGA VAWSRTFGGI
NSDDAAASLI ESAPGEFVFA GMFNATVSGG TANMDAWAVK LGPEPTPTPT PTATPTATPT
PVPTATPSKP SKAPIISQKP PVPTETMTAA PSPAMTVPTG TTSLSPTAAP TAPSSPGPTW
TTTPTAAPTV TGAPSPTMTA GPSPTMTPVG NDDDDDDDND DGNNQTGGAA NESLSGTVWF
DLNGDGARDP GEPGIPEISV RLIGQRTMMD YTTTGPDGSY RFGAIPSIGY AGVEFILPDG
YSCTVPGLDN HAAPLGTDVI FAEGGVDRQT LNAGLVGDLL PGTPAASYGW VLGTVWSDDS
RDGINDEAYG LTDVEVRLLD AGGNVAGSTR TRYHDSHFSM YLFGPLPPGE YSVAFTAPEG
YVFTSPGRDS YADPSTGATG PFTVGGGEAV VRGAGLFLSP APIPSPGEPE IKPSVENGTD
DEQEQRDDVA DGEDSEPGGP AVTDGPEAPV NETADDGDAA GEREPVWKIG DDWDEVRDND
DRKEIKDDDR EKADEVGESD RRDDGRDEDD