| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1725 |
|---|
| Symbol | |
|---|
| ID | 4846038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1727536 |
|---|
| End bp | 1727964 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640116423 |
|---|
| Product | beta-Ig-H3/fasciclin |
|---|
| Protein accession | YP_001047634 |
|---|
| Protein GI | 126179669 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGTA TCTTTGAGAC GGCCCGGGAA GATGGCCGGT TGAGCACCTC CGTTGCGATG
CTGCAGGCCG GAGGGATGGC GGAGACGCTC CTGGAAAGGG GGGAGTATAC GGCATTGTTT
CCGACGAACG AGGCGTACTC CGTGTTTTCC CGGGAGGTGC TGGACGCCGT CGCGGCCGAC
CTGGATCGGC TCACGGAGAT GATCAGGTAT CACGTGATCC AGGGCAAACT CACCACGCAC
GAGCTCTCGC GGATGGAGGC GATCAGGACG CTACAGGGGG ATCACCTGGA TATCACGGGC
ACTCCCGGCG CGATACGGCT GAACGATGCC GCCGTTATCC AGCCCGACAT CGAGTGCACG
AACGGTATCT ACCATGTCAT CGACAGGGTG CTCCTGCCGC GGGCGGTCGA GGCGCGGGTG
AAGCGGTAG
|
|---|
| Protein sequence | MKSIFETARE DGRLSTSVAM LQAGGMAETL LERGEYTALF PTNEAYSVFS REVLDAVAAD
LDRLTEMIRY HVIQGKLTTH ELSRMEAIRT LQGDHLDITG TPGAIRLNDA AVIQPDIECT
NGIYHVIDRV LLPRAVEARV KR
|
|---|
| |