Gene Memar_1576 details

Gene Information

• Locus tag: Memar_1576
• ID: 4846498
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: -
• Start bp: 1581160
• End bp: 1581750
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 640116269
• Product: hypothetical protein
• Protein accession: YP_001047487
• Protein GI: 126179522
• COG category: [S] Function unknown
• COG ID: [COG1751] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTCG TAACCCGGAA TACTTACTAC TTCGATGCGC CGGGTAGAGA GAACACCCAC 
GACGCCGCCC GGTTCGCCGT CGAGAGGGCA CGGGAACTCG GCGTCAAAAA GGTCGTTGTC 
GCGAGCAGCA GCGGCCGGAC GGCGCTTGCC TTCCGGGATG CTATGGCAGG AACGGACCTC 
GAACTGATCG TCGTCACCCA CGCGGTCGGG TTTTCAAAGC CCGGCGAGTG GGACTTCTCG 
CCGGAGGCGG CCGGGACCCT CCGGGCTGGG GGCGCGAAGA TCGTCACCGG GACGCACGCT 
CTCTCCGGGC TCGAACGCGC GATATCCCGC TCGTCGAAAC TCGGCGGGAG TTCCCGCACG 
GAAGCGATCG CCGAGGCGCT GCGGCGGACC GTCGCGGTCG GCCTGAAGGT CGCGGTGGAG 
TGCGTCCTCA TCGCGGCCGA CCAGGGCGCG GTCGGTGTCG ATGAAGAGGT GATCGCGGTC 
GGGGGCACCG CCACCGGTGC CGACACCGTC TGCGTCATCC GTCCCGCGCA TACCGCGTCG 
TTCTTCGATC TGCAGGTGCG CGAGATCGTT GCCATGCCGA GGAACCGGTG A 

 

Protein sequence

MSFVTRNTYY FDAPGRENTH DAARFAVERA RELGVKKVVV ASSSGRTALA FRDAMAGTDL 
ELIVVTHAVG FSKPGEWDFS PEAAGTLRAG GAKIVTGTHA LSGLERAISR SSKLGGSSRT 
EAIAEALRRT VAVGLKVAVE CVLIAADQGA VGVDEEVIAV GGTATGADTV CVIRPAHTAS 
FFDLQVREIV AMPRNR