| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1543 |
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| Symbol | |
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| ID | 4845922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 1548180 |
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| End bp | 1551023 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640116236 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001047454 |
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| Protein GI | 126179489 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.393804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATA AACCTGGAAG GAAAGCACTA TTTACCGGGC CGGTTGTGCC GGGTATGACA
GGACAGGAAC AGGGAGCAGT GGTACTGCCC GAGGCGATCG AGGCCGCACT CCACGCGGCG
CTTGAAGGCG ACGACTCCGT GCAGATCGAC CTTGCCGGCG TTCCGGAGAG TTACCGGCCG
CTGGCCACCT CGATCAACGC GCTGCTCGGG AAGAAGCAGG AGGAGAAGCA GCGCCTCAAG
CACCGGCTGG ACGAGGCAAA GATGCTTCTG AAGGGATCCG ATACGATCAT CCAGCAGAAT
CCGATGCCCA TCCTGGTCGT CGATCCGGAC TTCACGGTGA CGATGGTAAA CGCCGCCTAC
GCCGAGATGA GCGGAATCCC GATGGATCAG GTGCTCGGCA GGAGCCTGAA AGACTTCAGG
ATAACGTCCC AGAAGGGTTC CGGCCTCCGA CAGGCAATCC AGGAGAAGAA GCGGGTGTAT
GCGGAAGTCG TCGTCGAACT CCCCTCGGGC ACCCGTACGC TCGAGCAGTA CGGCATCCCG
CTGCTCGACA ACGAGAACGC GGTCGAGAGC ATCCTCATGG TCTACAACGA CCTCACCGAA
AAACGGCAGG AGGAGGAGGA GATCCAGAGG ATGCAGCATC GCATCGACAC GATGATCAAA
CTGAATCCGC TTGCCATCGC ACTCCTCCGC CCCGACAAGA GCCGGATCGA CATCAACGAC
GAGTATGCCC GGATGTGGCG CGGCACCCGC GAAGAGACCC TCGCGAAGAA ACTCTACGAC
TACGACATCA CCGTCATCGA CGGCGACCAC TTCTACGCCT GCTACGAGAC GAAGAAACCC
GCCCGGACGG ACGTCATGGT CAAGTGGCCC GACGGCGTCA GGAAATACCT CACCCTGAAC
GCCATCCCCA TCCTCGATGC GAACGGCGAG ATCGAGATGG CCTTCTACGT CTGGAACGAC
TGGACCGACC TCCAGAATAA GAAGGAAGAG GCCGAGAAAC TCAAGCACAG CGTCGACACG
ATGATCAAGC AGAACCCGCT TGCCATCGCA ACCCTCCGCG CGGACAAGAG CCGGATCGAC
ATCAACGACG AGTACGCCCG GATGTGGCGC GGCACCCGCG AAGAGACCCT CGCGAAGAAA
CTCTACGACT ACGACATCAC CGTCATCGAC GGCGAGCACT TCTACGCCTG CTACGAGACG
AAGAAACCCG CCCGGACGGA CGTCATGGTC AAGTGGCCCG ACGGTGTCAG GAAGTACCTC
ACCCTGAACG CCATCCCCAT CCTTGATGCG AACGGCGAGA TCGAGATGGC GTTCTACGTC
TGGAACGACT GGACCGACCT CAAGGAGAAG GAGGAGGAGG TCAAGGATAC CGAGCACCGG
GTCGACGCGA TGATCAAGCA GAACCCACTC GCCATCGCGA CCCTTCGCCC GGACAAGAGC
AGGATCGACA TCAACGACGA GTATGCCCGG ATGTGGCGGG GCACCCGCGA AGAAACCCTC
GCGAAGAAGC TCTACGACTA CGATATCACC ATCCTTGACG GCGATCACTT CTACACCTGC
TACGAGACGA AGAAACTCGC ACGGACGGAC GTCATGGTCA AGTGGCCCGA CGGCGTCAGG
AAGTACCTCA CCTTAAACGC CATCCCCATT CTCGACCGGA ACGGCGAGAT CGAGCTGGCC
TTCTACGTCT GGAACGACTG GACCGAGCAG CGGGAGAGGG AGGACCAGAT CCGCGACCTG
ATGGAGACCG CGAAGCGGGA GAGCGAGAGG CTTGGAGAGA GCGCCGGGGA ACTCGGGAAC
GCGCTTGCCG CCATGGCAAA GGGCGACCTG ACGGCGTTCG TAGAAGCAGA AACCGACGAC
CCGCTCCACC AGGTCAAGAC CGACTACAAC GCCTCGTTGA CCGCTATCCG CGCGCTTCTC
GCCGACGTGG CGAAAGCCGC TCAGCAGGTG GACATGACGA CGAAGGAGGT CAGCAAGAGC
ACCGACGAGA TCATCCGGGC GACGGAGCAG GTCGCCGTCT CGACGCAGCA GTCGTCCGAG
GACGCACGCC GCCAGCTCGA TAAGATCGAG GAGATCGGAA CGGACGTCAA CGACCTCTCG
GCATCCATCG AAGAGATTGC AAGCACGTCG CAGTCGGTCA TGGAGCAGGC CTCGAAGGCT
TCCAAGGAAG GAAACGACGC GGCCTCGCTC GGTGAAGTCG CGACGAACAA GATGCAGCTC
GTCGAGGAGA TCTCCAAGCA GACCGTAGGG GAGATCAGCA CCCTCAACAA CCAGATGCGG
GAGATCAACA ACATCGTCAA GTTGATCGCC GACATCGCGA ACCAGACCAA CCTCCTCGCG
CTGAACGCCG CGATCGAGGC CGCCCGGGCC GGGGAGCACG GCCGCGGGTT CGCCGTGGTC
GCCGGCGAGA TCAGAAACCT TGCCGGAGAG TCCAAGCGGG CGAGCCAGGA TATCGAGGAC
CTGATCCGGA CGATCCAGGC AAGCACCGAA AAGACCACCG ACTCGATGCA GGCATCCCAC
CAGGAGATCC AGGCAGGCAT CGAGAGCGTC AACAAGGTCA TCGTGGGCTT AAACCGGATC
GTCAACAGCG TGGAAGTGGT CACCCGCGGC ATCAGCGAGA TCACCAAAGC CACCGAAGAC
CAGGCGGGCT CCACCAACAA CGTCATGCAG AAGATGGACG AGTCCACCCA CATGACCAAG
GAGAGCCTGG ACCGCACCGA GGACATGGCT GCACTCGCCG AAGAGGTCAG CGCATCGACC
GAGGAGGTCG GAAGCGCTTC CCACGAACTG GCAAGCATGG CCGAACAGCT CAAGAAGGTA
ATGATGCAGT TCAAGCTGAA CTAG
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| Protein sequence | MIDKPGRKAL FTGPVVPGMT GQEQGAVVLP EAIEAALHAA LEGDDSVQID LAGVPESYRP
LATSINALLG KKQEEKQRLK HRLDEAKMLL KGSDTIIQQN PMPILVVDPD FTVTMVNAAY
AEMSGIPMDQ VLGRSLKDFR ITSQKGSGLR QAIQEKKRVY AEVVVELPSG TRTLEQYGIP
LLDNENAVES ILMVYNDLTE KRQEEEEIQR MQHRIDTMIK LNPLAIALLR PDKSRIDIND
EYARMWRGTR EETLAKKLYD YDITVIDGDH FYACYETKKP ARTDVMVKWP DGVRKYLTLN
AIPILDANGE IEMAFYVWND WTDLQNKKEE AEKLKHSVDT MIKQNPLAIA TLRADKSRID
INDEYARMWR GTREETLAKK LYDYDITVID GEHFYACYET KKPARTDVMV KWPDGVRKYL
TLNAIPILDA NGEIEMAFYV WNDWTDLKEK EEEVKDTEHR VDAMIKQNPL AIATLRPDKS
RIDINDEYAR MWRGTREETL AKKLYDYDIT ILDGDHFYTC YETKKLARTD VMVKWPDGVR
KYLTLNAIPI LDRNGEIELA FYVWNDWTEQ REREDQIRDL METAKRESER LGESAGELGN
ALAAMAKGDL TAFVEAETDD PLHQVKTDYN ASLTAIRALL ADVAKAAQQV DMTTKEVSKS
TDEIIRATEQ VAVSTQQSSE DARRQLDKIE EIGTDVNDLS ASIEEIASTS QSVMEQASKA
SKEGNDAASL GEVATNKMQL VEEISKQTVG EISTLNNQMR EINNIVKLIA DIANQTNLLA
LNAAIEAARA GEHGRGFAVV AGEIRNLAGE SKRASQDIED LIRTIQASTE KTTDSMQASH
QEIQAGIESV NKVIVGLNRI VNSVEVVTRG ISEITKATED QAGSTNNVMQ KMDESTHMTK
ESLDRTEDMA ALAEEVSAST EEVGSASHEL ASMAEQLKKV MMQFKLN
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