Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1498 |
Symbol | |
ID | 4846261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1496202 |
End bp | 1499444 |
Gene Length | 3243 bp |
Protein Length | 1080 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640116190 |
Product | UvrD/REP helicase |
Protein accession | YP_001047409 |
Protein GI | 126179444 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR02784] double-strand break repair helicase AddA, alphaproteobacterial type [TIGR02785] recombination helicase AddA, Firmicutes type |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTGA CTGAACGCCA GGCGCGGGCC GCGCTCGACC ACTCGACGAG CAAGTGCGTC ACCGCCGGTG CGGGGACGGG GAAGACGCAC GTCCTGGTGC AGAAGTACCT CAGCCTGCTC GAATCCGGTG TCGGCGTCGG CAATATCCTC GCGCTCACCT TCACCGAGAA GGCGGCCGGC GAGATGAAGA TCCGGGTCCG CCGGGCGATT GCGGAGAAGG AGGGCGAGCG GTGGGACGCG ATCCGCGACG AGTTTTTGTG GGCGAAGGTA TCGACCTTCC ACTCCTTCTG CGCCTCGGTT CTCCGGGAGT TTTCCATCGG GGCCGGCGTG GGGCCGTCCT TTGCCGTCCT CGACGAGGGG GAGGCGTTCC GGCTCCGCGA GGAGGCGATC GACGACCTCA TCCACGGTGA TCCGCCCACG GCGTGCCGGG ACGCGGTGAT CGGCGCTCTC CGGGCCGTCG GGGCCTACGA ACTGAAGAAC TACCTCGAGG CGCTGTACTC CCGCCGCGGG GCTGCGGAAG CGTTCTTTGC CGCGCTCGCG GAGAGCGAGG AGGAGGTGCT CGACGCCTGG CGGACGGCCC TGGAGCGGTG CCAAACGGAA GCCCTGGAGG CCTTCCTCTC GCGGGCCGCC CCCTCTATCG AGACGCTTCG TGACCTTGCC GCCCGCTACC CGGGCGAGCG CGACCCGGCC GGGGCCTACC TCCGGGCGGT CGAACCCTGC CTCGCCGGCG AGATCGCGGT CGCCGAACTT GCCGCGGTTC ACGACAATTC GGGGTTCCGC AAGAACATGG GGCAGAAGAA GAACTGGGAG GGGGACGACC TCGACAACCT CCGGGCGGCC TACGGCGTCC TCAGGCAGTG CCTCACCGAT CACGCGGGTG CCTGCTCGCT CACCCTTGAT GCGGCCGACC CCTTCACCCG GGCGACGCTC GACTTCCTCC GCGACCTCGG GGTGGTCTTT AAGGCCTTCC TCGACTCGGT CGAGGCGGAG AAGCGGCGGA TGAACGCCCT CGACTTCGAC GACCTGGTGA ACCGCACCCA CCGGCTCTTT CGCGACCGGG GGGACATCGT CGAGACGCAT TTTAGGAGCC GGTTCCGGTT TATCCTGGTC GACGAGTTCC AGGATACCGA TCCCGTCCAG ATCGCCATCA TCCGCACCCT CCTCGGCGAT TCCGCGAACC TGTTCGTCGT CGGCGACCCG AAACAGTCCA TCTACCTCTT CCGGGAGGCC GACGTGACGC AGTTTTCGCA TACCCGCGAC CTGATCGAGC GTGACCTCGG CGGGGAGACG GTCGCGCTCG ACGTCAACTT CCGGAGCACG CCCGAGGTCG TCGGGTTCAC GAACGCCGTC TTTTCCGCCC TGATGGCGGA GGCCGGACGG CCCTGGGAGT TCCTCTACGA ACCGCTGCAT GCGTTCCGCC GGGACGACGC CGGTTCGGTC GAACTCCTCC TCTGCCAGAA GATCAGGGAC CGTGCGGCCG GCCGCCGGGC CGAGGCGGAG ATGGCGGCAA GGAAGATCCG TTCTCTCGTC GAGCGGGGAG AGAAGCGGGT CTCCCGCGAC GGGGAGGTCC GGCCGGCAGG CTACGGCGAC GTCGCCGTCC TGCTCGAGCG GCGGACGAAC CTCGCCTACT ACGAGTGGGC GCTCGCCCGC TACGGCGTTC CCTACCACGT CCATGCCGGT CTCGGGTTCT ACGAGCGCCA GGAGGTCTAC GACCTCTACA ACATCCTCCG GTTCCTCGCA AACAACCTGG ACGACGCGGC GCTCTACGGC GTGCTGCGCT CACCCTACTT CGGGTTCTCC GACGCCCGGC TCTTCCATAT CGCCCGGGCG CCCGGGGCTT CCCTCTGGGA GCGGCTGCAG GCCGCGGCGG AGCCCGCGGC GGCGACCCTC CGTGAGTGGC TCTCGCTCTC CCGCAGGCTC CCGCCCGCCC GCCTCCTCCG CCGGATCGTC GACGAGTCGG GGATCTTCGT CGTCTTCGGC GGGATGGCCG GGGGCGAGCA GGCCGCGGCG AACGTCGAAA AGCTGATCGC CCTCGCGAGA GATGCCGACT GCTCCACGCT CGCCGGTTTT GTCGCGGAAC TCGGCCGCTC CATCGACGCC GGAGACCGGG AGGGGGATGC TCCTCTCGAC CTTGCATCCG CGGACTCGGT CTCGATCATG ACGGTGCACG CCGCGAAGGG GCTCGAGTTC CCGGTCGTCG TCGTCCCCGA CCTTGCGGAG ACGCCGCGGT CCGGCGGGGG CACCATCATG GTGGAGGACG GGCTGCTGCT CGGCGTCTCG ATACCGAACC CGGCAAACGA CCACGAGCGC GAGGAGACGC CCGTCCTCCG GCTTCTCAAG GACGAATACC GGCAGAAGGA GGAGGCGGAG CGCAAACGGC TCTTCTACGT CGCGGTCACC CGGGCAGAGG ATCACCTCAT CCTCTGCGGG GAGATGCCGG TCGCGGTCCC GGAGAGCCTC CGCGACGCCA GGACCCGGAT GGCCTGGCTC GCGCACTGCC TCGGGCTCTG CGACGAGGTC TACGCCCGGG GCGAAGCCGT CCTCGGGACG CTCCGCATCC CGATCACCCT CGACCCCGCG GCGATCCCGG TCGACGTGCA GGAGACCGTC CCGGTCTGCC TGCCGGTGCC CGACGACGTC CCCGCGGCGC CCGTCCCGGC GGGCATTCCT TCCAATGGGA AGAAGGAGCG GGTCTACTCG GCAAGCGAGC TTGAGGCGTA CCTCCGCGGC CCGGCGGAGT CACGGTTGCC GGTGTTCGCC GCCGGGGAGG ATGCGCTGAC CCGCGGCCTC GTCGTCCACG AGGTCTTCCG CGGCCGCGAT CCCGCCGCGG TGCTGCGGCG GTACGGGCTG GACCCTGCCG GGGCTGTGGA GTACCAGGAA CTCTACGTCC GGTTCCTTGC ATCGCCCCTG ATGCGGGGGA TCGTCCGCGA CCACCGCGAG GTGCCGTTTT CGGCCCGGGT GAACGGGTTT GCGTTCAGGG GGGTCATCGA CCGGCTGGTG CAGCGGGTGA ACGGCACCTG GATGCTCATC GACTACAAGA CCGGGACGCC GGGGGACGCC GGGGAGTATG CGATCCAGAT GGCGGTCTAT CATCGCGCCG CCGCCCAGAT CCTCAGCGCT CCGGTCACGC CCTACCTCTA TTTCGTCGAT GCCGACCGCT GGGCGGAGAT CGAGGTGGAC GAGGATCTGG TCTTTGCCGA GATTTCCCGT GCGATCAGCG GGATCGAGGA GGAAGGTCTT TGA
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Protein sequence | MGLTERQARA ALDHSTSKCV TAGAGTGKTH VLVQKYLSLL ESGVGVGNIL ALTFTEKAAG EMKIRVRRAI AEKEGERWDA IRDEFLWAKV STFHSFCASV LREFSIGAGV GPSFAVLDEG EAFRLREEAI DDLIHGDPPT ACRDAVIGAL RAVGAYELKN YLEALYSRRG AAEAFFAALA ESEEEVLDAW RTALERCQTE ALEAFLSRAA PSIETLRDLA ARYPGERDPA GAYLRAVEPC LAGEIAVAEL AAVHDNSGFR KNMGQKKNWE GDDLDNLRAA YGVLRQCLTD HAGACSLTLD AADPFTRATL DFLRDLGVVF KAFLDSVEAE KRRMNALDFD DLVNRTHRLF RDRGDIVETH FRSRFRFILV DEFQDTDPVQ IAIIRTLLGD SANLFVVGDP KQSIYLFREA DVTQFSHTRD LIERDLGGET VALDVNFRST PEVVGFTNAV FSALMAEAGR PWEFLYEPLH AFRRDDAGSV ELLLCQKIRD RAAGRRAEAE MAARKIRSLV ERGEKRVSRD GEVRPAGYGD VAVLLERRTN LAYYEWALAR YGVPYHVHAG LGFYERQEVY DLYNILRFLA NNLDDAALYG VLRSPYFGFS DARLFHIARA PGASLWERLQ AAAEPAAATL REWLSLSRRL PPARLLRRIV DESGIFVVFG GMAGGEQAAA NVEKLIALAR DADCSTLAGF VAELGRSIDA GDREGDAPLD LASADSVSIM TVHAAKGLEF PVVVVPDLAE TPRSGGGTIM VEDGLLLGVS IPNPANDHER EETPVLRLLK DEYRQKEEAE RKRLFYVAVT RAEDHLILCG EMPVAVPESL RDARTRMAWL AHCLGLCDEV YARGEAVLGT LRIPITLDPA AIPVDVQETV PVCLPVPDDV PAAPVPAGIP SNGKKERVYS ASELEAYLRG PAESRLPVFA AGEDALTRGL VVHEVFRGRD PAAVLRRYGL DPAGAVEYQE LYVRFLASPL MRGIVRDHRE VPFSARVNGF AFRGVIDRLV QRVNGTWMLI DYKTGTPGDA GEYAIQMAVY HRAAAQILSA PVTPYLYFVD ADRWAEIEVD EDLVFAEISR AISGIEEEGL
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