Gene Memar_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1409 
Symbol 
ID4848099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand+ 
Start bp1402865 
End bp1403467 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content59% 
IMG OID640116099 
Producthypothetical protein 
Protein accessionYP_001047320 
Protein GI126179355 
COG category[S] Function unknown 
COG ID[COG4854] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGA GAACCTATCT CATCTGCATC GCCCTGGTGG CAATCGGCCT GGTCTTTGCT 
CTCGGATTCG GCCTGACGAC CGCAAACATG ATCGTCCCGG TCGTCGCCGT CATTGCCGGC 
ATCGCTATCC TGGCTCTCTG CCGCCGCAGC GTGACGGAGG TCACGGAAGA CGAACTCTCC 
ACGATCCTGC ACGGGAAAGC GGCGCTCAGC GCACTTGAGG TGACCATCCT CATCGCCGCG 
ATCGGATTTG CTGCGCTGAT GAGCTTTTCG TCCGGCGGTG GATCCGGCTG GGGCCTGGCA 
ACATACGACA ATGGATCGAC CAAGGTCTAC TACGGGGTAC TCTCTATCTC TCCAACACTC 
TCCGTCTCTC CTCTAGATCT GAATTACGAA AGTTACTCCC TGTACGAAGG CTCCTACCTC 
ATCCCCGACC CGGCAAACCT GACTTTTGAC GACGTCATCG CCATTGATGC GATGTTTGCC 
GAAGGCCACC GCATCCGTGA TACGACCCGC GCGTTCGGTG CGGCGCTCGG CGCGGTCACG 
GTGCTGTTGA CGGCACTGTA CGGCGCGTTC CTGTGGTATT ACAACAGAAA ATACGGGGCG 
TAA
 
Protein sequence
MKQRTYLICI ALVAIGLVFA LGFGLTTANM IVPVVAVIAG IAILALCRRS VTEVTEDELS 
TILHGKAALS ALEVTILIAA IGFAALMSFS SGGGSGWGLA TYDNGSTKVY YGVLSISPTL 
SVSPLDLNYE SYSLYEGSYL IPDPANLTFD DVIAIDAMFA EGHRIRDTTR AFGAALGAVT 
VLLTALYGAF LWYYNRKYGA