Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1407 |
Symbol | |
ID | 4846944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 1398231 |
End bp | 1400201 |
Gene Length | 1971 bp |
Protein Length | 656 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640116097 |
Product | DNA gyrase, B subunit |
Protein accession | YP_001047318 |
Protein GI | 126179353 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.68269 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATA CCTACGATGC TTCACACATC ACGGTACTGG AAGGCCTGAG GCCTGTGCGG GAACGTCCCG CCATGTACAT AGGCAGCACG GAGAGCCGGG GACTTCACCA CCTGGTCTAC GAGGTCGTGG ACAACGCCGT AGACGAGGCT CTCGCCGGGT TCTGCGATCT GATCCAGGTG ACCGTCAACC GGGACGGCTC GGTCTCGGTT GATGATAACG GCCGTGGCAT TCCGGTCGAC CTCATGCCCC AGTACGGCAA GAGCGCGCTC GAGATCGTCC TCACCGTGCT GCACGCCGGC GGAAAGTTCG ACAAGAATAC CTACCAGGTA TCCGGCGGCC TGCACGGCGT CGGTGTCTCG GTCGTCAACG CCCTCTCGAG CTGGCTCGAT GCAACGGTCT TCAAGGACGG CAACGTCTAT GCGATGCAGT TCCGGCAGGG TCTGGTCGCA AAACCGCTCG CGAGCCGCCC GGAGACCGAG CACGAGATGG AGGCGCGGTA CGAGGAGCGC TATGGTGCCC GGGACGGGCA GCCGCTCGAC TACGAACGGC TCCGGGGGAC CCGGATCACG TTCCAGCCCG ACCGTTCGAT CTTCGAGACC GTCGAGTTCG ATTACGACGT GCTGGATCAC CGGCTCCGCG AACTCGCCTA CTTAAACAGC GGCCTCACCA TTGTCCTCCG GGACGAACGC ACCGGCGATG TGGTCACCTA CTGCTTCGAG GACGGGATCC GGCAGTTCGT CGCCCACCTC GGCGAGGGGA AGGAGAGCCT CCACGACGAT ATCATCTACT TCCAGAAGCG CGACTCCGAG AGCAAGGTCG AGGTCGAGGT CGCCCTGCAG TACAACAACT CATACTCGGA GACGATCTAT ACCTACGTCA ACAGCGTCAA CACCCGGGAG GGCGGCACCC ACCTCGAAGG CTTCCGGAGC GCTCTCACCC GGGCGATCAA CAGCGCTGCC CACCGTAACA ACCTCCTAAA AAACAACGAT GCCCAGGTCA AGGGTGAAGA CGTCCGGGAA GGGCTCGCCT GTGTCATCAG CACCCGGGTG GCGAATCCGC AGTTCGAAGG GCAGACCAAG ATGCGCCTTG GGAACAGCAA CGTCCGGGGC ATCGTGGACT CTCTCGTTTA CTCCTCGCTC ACCGAGTACT TCGAGGAGCA CCCAAAGACC CTCCAGACGG TCGTGGACAA GGCGATGGCG GCCGCCAGAG CAAGGGAAGC CGCCCGGACT GCACGTGAAC TCGCCCGGCG GAAGAGCACG CTGGAGTCGA CCGGCCTCCC CGGGAAACTC GCCGACTGCC AGGAACGCGA CCCGGCAAAG AGCGAACTCT ACATCGTGGA GGGAGATTCG GCAGGGGGTT CCGCGAAACA GGGGCGGGAT AGGAAGTTCC AGGCGATCCT TCCCCTGCGG GGGAAGATCC TGAACGTCGA GAAGGCGTCG GAGCACAAGA TCCTGAAGAA CGCCGAGATT CAGGCGCTGA TATCCGCGAT CGGCACCGGA GTCGGCGACA GTTTCGACGC GGAACGGGCC CGGTACCACC GGATCATCCT GATGACGGAT GCCGATGTCG ACGGAGCACA CATCCGGACG CTCCTCCTCA CGTTCTTCTA CCGCTACATG GTGGGGCTCG TCGAAAACGG CTACATCTAC ATCGCCCAGC CGCCTCTCTA CCGGGTGGCG AAGGGCAGAC AGGAACAGTA TGTCTACCGC GAAGAGGAGA TGCGAGAGAT CCTCGCCGAG TGGGGCGAGA AAGGCGTCTC GATCCAGCGC TACAAGGGTC TCGGTGAGAT GAACGCCGGA CAGCTCTGGA GCACCACGAT GGACCCGGCA AACCGGATTC TCAAGCAGGT GAAGATTGAG GACGCCGCCT ACGCGAACGA AATATTCGAG AAACTTATGG GAGAGAACGT GGACGCCCGG AGAGATTTCA TCCGCAGGCA TGCAAAGGAG GTGAGCAACC TTGACGTCTG A
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Protein sequence | MTDTYDASHI TVLEGLRPVR ERPAMYIGST ESRGLHHLVY EVVDNAVDEA LAGFCDLIQV TVNRDGSVSV DDNGRGIPVD LMPQYGKSAL EIVLTVLHAG GKFDKNTYQV SGGLHGVGVS VVNALSSWLD ATVFKDGNVY AMQFRQGLVA KPLASRPETE HEMEARYEER YGARDGQPLD YERLRGTRIT FQPDRSIFET VEFDYDVLDH RLRELAYLNS GLTIVLRDER TGDVVTYCFE DGIRQFVAHL GEGKESLHDD IIYFQKRDSE SKVEVEVALQ YNNSYSETIY TYVNSVNTRE GGTHLEGFRS ALTRAINSAA HRNNLLKNND AQVKGEDVRE GLACVISTRV ANPQFEGQTK MRLGNSNVRG IVDSLVYSSL TEYFEEHPKT LQTVVDKAMA AARAREAART ARELARRKST LESTGLPGKL ADCQERDPAK SELYIVEGDS AGGSAKQGRD RKFQAILPLR GKILNVEKAS EHKILKNAEI QALISAIGTG VGDSFDAERA RYHRIILMTD ADVDGAHIRT LLLTFFYRYM VGLVENGYIY IAQPPLYRVA KGRQEQYVYR EEEMREILAE WGEKGVSIQR YKGLGEMNAG QLWSTTMDPA NRILKQVKIE DAAYANEIFE KLMGENVDAR RDFIRRHAKE VSNLDV
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