Gene Memar_1401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_1401 
Symbol 
ID4848067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand
Start bp1393238 
End bp1394368 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content68% 
IMG OID640116091 
Productgeranylgeranyl reductase 
Protein accessionYP_001047312 
Protein GI126179347 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGCGCGG GGCCTGCCGG GAGCGCCGCG GCGCGGGCGT GCGCAAAAGA GGGGCTCAAG 
ACGCTCTGTA TTGAGGAGCA CGGAACGATC GGCTACCCGG TGCAGTGCGC TGGACTGCTC
TCGGTCTCCG CCCTTGCCGA GTGCAACGTC TCGAATTGCT CGGTCTTGAA CGAGGTGAGC
GGTGCCCGCA TGGTCTCGGG TCTCGGAGGA GAACTCCTCT TCGATGCGGG GGTCACGAAG
GCTTACGTCG TCGACCGGTG TCTCCTCGAC CGGGAGATGG CACAGAAGGC AGCGGACGCC
GGGGCGGAGT TCCGCCCAAA GACCAGTGCA TCGGGCATCA GCGGCTCCTC GCTCCTGACC
CGGGGCGTCC GCGGGCGGGA GGAGATCCCC TTCCGCCTCC TGATTGCCGC CGACGGACCG
CGGAGTTCCG TCGCCCGCAT GCTCGGCCTG CAGCGCCCTG CGCTCTACCT CGCCGGGATT
CAGGCGGAGG TTCCCTACGA GATGGACCCG CGCTACGTGG AACTCCACCC CAACGCCTCG
CCCGACTTCT TCGGGTGGGT GATCCCGGTC TCGGCGACCC GCGCCCGTGT CGGCCTCTGC
GCCCGGGAGC ACGCAAAAGA CCACTTCGAC CGGTTCACCG CCCGCTACGG GGGGAACTCG
CTCCACCTCG CGAGCGGGGT CATCCCGCTC GGGGTCATGC CCCGGACTTA CGGACGGCGG
GCACTCGTCG TCGGCGATGC GGCGGGGTTC GCAAAGCCCA CGTCTGGCGG CGGGGTCTAC
ACCGGCGTCC GGTCGGCGAA ACACGCGGCC GCCGTCGCCG CGGCGTGCTG TGCGCGCGGG
GAGTTCGACG ACGGGAGCCT CCGGGACTAT GAGCGGCGCT GGAAAGAGGA TTTCGGGAAA
GAGCTCGATA TCGGGATGAA AGCGCTTCAT ATGCGCCAGA AGATGACGGC GGAGGAGATC
GACCGCCTCT GCCGGGCTCT CGACGATCCG GATCTCATCG CGACGATCGT GGAGCACGGT
GACATGGACA GGCCGGGCAC CCTGCTCCGC AAACTTGCCC TGAAACCCGC GCTGGCCCGG
GCAATGGGCA TACTTTTCGC ATCGGGAGTA CGCCGGATTC TTACCGGCTG A
 
Protein sequence
MGAGPAGSAA ARACAKEGLK TLCIEEHGTI GYPVQCAGLL SVSALAECNV SNCSVLNEVS 
GARMVSGLGG ELLFDAGVTK AYVVDRCLLD REMAQKAADA GAEFRPKTSA SGISGSSLLT
RGVRGREEIP FRLLIAADGP RSSVARMLGL QRPALYLAGI QAEVPYEMDP RYVELHPNAS
PDFFGWVIPV SATRARVGLC AREHAKDHFD RFTARYGGNS LHLASGVIPL GVMPRTYGRR
ALVVGDAAGF AKPTSGGGVY TGVRSAKHAA AVAAACCARG EFDDGSLRDY ERRWKEDFGK
ELDIGMKALH MRQKMTAEEI DRLCRALDDP DLIATIVEHG DMDRPGTLLR KLALKPALAR
AMGILFASGV RRILTG