| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1381 |
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| Symbol | |
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| ID | 4848251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1374167 |
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| End bp | 1376233 |
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| Gene Length | 2067 bp |
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| Protein Length | 688 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640116071 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001047292 |
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| Protein GI | 126179327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGTTGA AGTATGTTCC CACAACATGT CCTTATTGCG GCACCGGCTG CAGTTTCAAC
CTTGTCGTCC AGGACGGCAA AGTTGTTGGA ACGGCACCCT ACCGCCGCTC ACCCGTGAAC
GAGGGAAAGG TCTGCCCGAA GGGCACCTAC GCTCATGAGT TCGTGAACAG CCCGGACCGC
CTGACGAAGC CGCTCATCAA GAAGAACGGC AAATTCGAGG AAGCAACCTG GGACGAGGCC
TACGACCTGA TCGCCCGGAA ATTCAAGTCG TACAAGCCCG ATGAGTTCGC GGCGCTTGCA
TCGGCCCGTG TCTCCAACGA AGAGAACTAC CTGCTGATGA AGTTCACCCG CGGCGTCATG
AAGTCCCGGC ACATCGACCA CTGTGCCCGT CTCTGCCATG CGTCCACCGT CGCCGGCCTC
GCCGCCTCGT TCGGCTCCGG TGCGATGACC AACTCCATCC TCGACATCGC CGACTCCAAG
TGTGTCTTCA TCCTCGGGTC CAACACATTC GAGCAGCACC CCCTCATCGG CCGCAAGGTC
ATGCAGGCCA AGAAAAACGG TGCAAAAATC ATCTACGCCG ACCCACGCTA CACCGCGACC
GCAAAGCAGG CCGATCTCTA CATGCCGTTT GTGTCCGGCA GTGATGTCGC CATCCTCAAC
TGCATGATGC AGGAGATCAT CAAGAACGGC TGGGAAGACA GGGAGTTCAT CGCCAACCGG
ACGAAGGACT ACGAGAAACT CAAGGAAGTC GTCATGAAAG ACACTTACAG CCTTGAGAAC
GTCTCGAAGA TCTCCGGTAT TCCCGCCGAA AGCCTCAAGA CCGCCGCCGA GTGGTTCGGC
ACCGCTGAAT CCTCAGCGCT CCTCTACTCG ATGGGTATCA CCCAGCACAC CGTCGGCGTC
GACAACGTCC GGTCGACCGC AAACCTCCAG ATGCTCACCG GCAACCTGGG CAAGCGCGGC
GGCGGCGTGA ACGCGCTCCG TGGCCAGAAC AACGTCCAGG GCGCCTGCGA CATGGGTGCT
CTCCCGGTCG TCTTCACCGG CTACCAGAAG GTCATCGACG AGGCCGCCCA TAAGAAGTTC
GCCGACGCCT GGGGCTTTTC CGACGGCATC TGCGAGCCGA AGAACGGCTA CGAGGTCACC
GTCATGATGG ACATCCTGAC CGACAATCCC GGCGAGCTCA AGTGCATGTA CATCATGGGC
GAGAACCCGA TGCTCTCGGA CCCGGACCTG ACCCACGTCA GGCACGCCAT TGAGAGTCTG
GAGTTCCTGG TCGTCCAGGA TATCTTCCTG ACCGAGACCG CCGAACTCGC CGACGTCGTT
CTGCCTGCGG CATGTTACGC GGAGCGCGAC GGCACCCAGA CCAGCACCGA GCGGCGTGTC
CAGATGTGGC GCAAGGCCCA GGACCCGCCC GGCGAGGCGA AGGTCGACTG GCAGATCATC
AGCGAGCTCG CCGCGAAGAT GGGCTACGCT GCCCAGTTCC CCTACCGGAG TGCCGAAGAG
ATCTTCAGCG AGATCGCCGC CCTCACCCCG TCCTACCACG GGATGAACTA CGAACGGCTC
AACAAGCCTG AGGCCCTGCA CTGGCCCTGC CCCGCAGTCG ACCACCCCGG CACCCCGATC
CTGCACATCG GCAAGTTCTC GCATCCCGAC GGCATGGGCG TCTTTGCGCC CCTCGAGTGG
AAACCGCCGG CGGAAGTCCC CGACGCGGAG TATCCGTTCG TGCTCACGAC CGGCCGTGTC
CTCTGGCACT GGCACACCGG CACCATGACC CGCCGGTCTG CAACGCTCGA CCATGAGGTC
CCGACCGGCT GGATCGAGAT CAATCCCGAG GATGCGCAGG CGCTCGGCAT CAAGAACAAG
GAAATGATCC GTGCCGTCAC CCGCCGTGGG TCCGTCGACG TCCCCGCGAG GGTGACCAGA
GACATCATGA AGGGTGTCAT GTTCATGCCG TTCCACTTCA AGGAATGTGC CGCGAACGTC
CTGACGAACA ACGCACTCGA TCCCGTAGCA AAGATCCCCG AGTTCAAGGC CTGTGCTGTG
AAGGTCGAGA AGATTACGGA GGCCTGA
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| Protein sequence | MTLKYVPTTC PYCGTGCSFN LVVQDGKVVG TAPYRRSPVN EGKVCPKGTY AHEFVNSPDR
LTKPLIKKNG KFEEATWDEA YDLIARKFKS YKPDEFAALA SARVSNEENY LLMKFTRGVM
KSRHIDHCAR LCHASTVAGL AASFGSGAMT NSILDIADSK CVFILGSNTF EQHPLIGRKV
MQAKKNGAKI IYADPRYTAT AKQADLYMPF VSGSDVAILN CMMQEIIKNG WEDREFIANR
TKDYEKLKEV VMKDTYSLEN VSKISGIPAE SLKTAAEWFG TAESSALLYS MGITQHTVGV
DNVRSTANLQ MLTGNLGKRG GGVNALRGQN NVQGACDMGA LPVVFTGYQK VIDEAAHKKF
ADAWGFSDGI CEPKNGYEVT VMMDILTDNP GELKCMYIMG ENPMLSDPDL THVRHAIESL
EFLVVQDIFL TETAELADVV LPAACYAERD GTQTSTERRV QMWRKAQDPP GEAKVDWQII
SELAAKMGYA AQFPYRSAEE IFSEIAALTP SYHGMNYERL NKPEALHWPC PAVDHPGTPI
LHIGKFSHPD GMGVFAPLEW KPPAEVPDAE YPFVLTTGRV LWHWHTGTMT RRSATLDHEV
PTGWIEINPE DAQALGIKNK EMIRAVTRRG SVDVPARVTR DIMKGVMFMP FHFKECAANV
LTNNALDPVA KIPEFKACAV KVEKITEA
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