| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1322 |
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| Symbol | |
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| ID | 4847176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1307954 |
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| End bp | 1310758 |
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| Gene Length | 2805 bp |
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| Protein Length | 934 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640116013 |
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| Product | excinuclease ABC, A subunit |
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| Protein accession | YP_001047234 |
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| Protein GI | 126179269 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0178] Excinuclease ATPase subunit |
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| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0124703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA TCACCATCAA GGGGGCGCGG GAGCACAACC TCAACAACAT CACCGTCGAA
CTCCCGCGCG ACCGGCTCAT CGTCCTCACC GGCGTGTCCG GATCGGGGAA ATCCACGCTT
GCCTTCGATA CCATCTACGC CGAAGGGCAG CGGCGCTACG TGGAGTCGCT CTCCGCGTAT
GCACGGCAGT TCCTCGGGCT GATGAAGAAG CCCGACGTTG ACAGCATCGA CGGGCTCTCG
CCTGCCATCT CCATCGAACA GAAGACGACG TCGAAAAATC CCCGGAGCAC CGTCGGCACG
GTCACCGAGA TCTACGACTA CCTGCGGCTC CTCTTCGCCC GGATAGGGAC GCCGTTCTGC
CCGGAACACC ATATCCCCAT CGAGGCCCAG TCGCCGGAGA AGATAGCCGA CCACATCGCC
TCGACGATGG CCGGGACGGT CACCATCCTC GCCCCGGTCA TCCGGCAGAA GAAGGGTACC
TACCAGCAAG TCTTCAAGGA CCTCGACCGG GAAGGCTACG CCCGGGTCCG GGTCAACGGC
GAGATCCGAC GGACGGACGA GGAGATCACC CTCGAGCGCT ACCGCAAGCA CGACATCGAT
GTGGTCGTCG ACCGACTGAG CGTCGACGAG CGGTCGAGGC TCGTTGAGGC GATCGAGAAC
GCCCTTGCAA AGTCCGAAGG GCTCGTCATC GCCGTCGGCG AGGATGGCCG GGAAGAGACC
TGCTCGGCGC TCATGGCCTG CCCGGTATGC GGAATTGCGT TCGAGGAACT TCAGCCCCGG
ATGTTCTCCT TCAACAGCCC CTTCGGCGCC TGCGAGGAGT GCAACGGGCT CGGGATCAAG
ATGGAGTTCG ATCCGGACCT GATCATCCCG GACAAGAGCA AGTCCATCGC CGAAGGCGCC
GTCATGCTCT ACCGGAACTT CCTCGACGGT TACCGGAGCC AGTACCTCGG CGCTGTCGCG
AAACACTTCG GGTTCTCGGT CTTAACGCCG ATCAAGGACC TCACCGAGCG GCAGTATAAT
GCCCTGATGT TCGGCTCGCC GGAGCAACTC CGCCTCTCGA TGAGGACGAG GAACGGGGAC
TCGTGGTCGC ACTCCGGGAC GTGGGAAGGC CTCGCCCCGC AGGCCGAGCG GCTCTACCAC
CAGACCCAGT CGGAGTACCG TCGCCGCGAA CTCGAGAAGT TCATGCGGGT CCTCCCCTGC
CCGAAGTGCG GGGGCAAGAG GCTCAAAGAC AAGGTGCTTG CCGTGAAGGT CGCCGGGAAG
TCCATCGTCG AGGTCACCGA CCTTTCGGTT ACGGGAGCGC TTTCGTTCTT CCGGACGCTG
GACCTCACCG AGAGCCAGCG CGAGATTGCA AAGCAGGTCT TAAAAGAGAT CATCGCCCGG
CTCGAGTTTC TGGAGCAGGT CGGCGTCGGC TACCTGACCC TCTCGCGGAG CGCCGGGAGC
CTTTCGGGAG GGGAAGCGCA GAGGATACGC CTCGCGACGC AGATCGGGTC GAACCTCACG
GGGGTTCTCT ACGTTCTCGA CGAACCCTCC ATCGGGCTGC ACCAGCGGGA CAACCGGAAA
CTCCTCGAGA CCCTGCAGCA CCTCCGCGAC CTGGGAAACA CCCTCGTCGT GGTCGAGCAC
GACGAGGAGA CGATCCGGAG CGCCGACTGG GTCGTGGACA TGGGGCCCGG GGCCGGGCTC
CACGGCGGCG AGATCGTCGC GGAAGGGCCG CCGGACGCTA TCGCGCGAGC CCCCACCTCG
CTCACGGGCC GTTACCTTGC GGGCGACCTC AGGATCGAGG TCCCCACGAC CCGCCGGCAG
AGCGACCGGT TCATCCGCCT TGCGGGCTGC CGGGAGAACA ACTTGAAGAG CATCGACGCG
AACATCCCCA TCGGCGTCCT GACGGTCGTC ACCGGGGTCT CGGGGTCGGG GAAGTCCACG
CTCATCTACG AGACGCTTTA CCGGGCGCTG ATGCAGAAAC TCCACGCGTC AAGGGAACCC
CCGGGTAAAC ACGGCAACCT TGCCTTCGAC GACGAGATCG ACAAGGTGAT CGTCATCGAC
CAGAGCCCCA TCGGGCGGAC GCCGCGCTCG AACCCGGCGA CCTACACCAA GGTCTTTGAT
GAGATCCGGA AGGTCTTTGC CGAAACGAAG GAGGCGAAGG TCCGGGGCTA CAAGCCCGGC
CGGTTCTCGT TCAACGTCAA AGGCGGGCGG TGCGAGGCCT GCCAGGGCGA CGGTCTCATC
AAGATCGAGA TGAACTTCCT CCCCGACGTC TACGTCGAGT GCGAGGAGTG CAAGGGGGCG
CGCTACAACC GCGAGACCCT CGAGGTGAAG TACCGGGGCA AGTCCATCGC CGACGTCCTC
GACATGAGCG TCGAGGAGGC GATGGATCTC TTCGAGAACG TCCCCTCGAT CAGGAACAGG
CTCGACACCC TCTCGAGGGT CGGGCTCGGC TATATCAAAC TTGGCCAGAG TTCCACCACT
CTCTCGGGCG GCGAGGCGCA GCGGATCAAG CTGACCCGGG AACTCGCAAA GCGGGCCACG
GGAAAGACGA TCTACCTTCT CGACGAACCG ACGACCGGGC TGCACTTCCA CGACGTGAAG
AACCTGATCG CCGTCCTCGA CGATCTGGTG GCCCGGGGGA ACACGATGGT GGTTATCGAG
CACAACCTGG ACGTGATCAA GTCCGCGGAC TACATCATCG ACCTCGGCCC CGAGGGCGGG
GACGCCGGCG GCGAGGTCGT CGCGGTCGGA ACCCCCGAAG AGGTTGCCCT GGTCGAAGGG
AGCCACACGG GCGCGTTCTT AAAGGAGATC CTCAAGAAGC CATGA
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| Protein sequence | MKKITIKGAR EHNLNNITVE LPRDRLIVLT GVSGSGKSTL AFDTIYAEGQ RRYVESLSAY
ARQFLGLMKK PDVDSIDGLS PAISIEQKTT SKNPRSTVGT VTEIYDYLRL LFARIGTPFC
PEHHIPIEAQ SPEKIADHIA STMAGTVTIL APVIRQKKGT YQQVFKDLDR EGYARVRVNG
EIRRTDEEIT LERYRKHDID VVVDRLSVDE RSRLVEAIEN ALAKSEGLVI AVGEDGREET
CSALMACPVC GIAFEELQPR MFSFNSPFGA CEECNGLGIK MEFDPDLIIP DKSKSIAEGA
VMLYRNFLDG YRSQYLGAVA KHFGFSVLTP IKDLTERQYN ALMFGSPEQL RLSMRTRNGD
SWSHSGTWEG LAPQAERLYH QTQSEYRRRE LEKFMRVLPC PKCGGKRLKD KVLAVKVAGK
SIVEVTDLSV TGALSFFRTL DLTESQREIA KQVLKEIIAR LEFLEQVGVG YLTLSRSAGS
LSGGEAQRIR LATQIGSNLT GVLYVLDEPS IGLHQRDNRK LLETLQHLRD LGNTLVVVEH
DEETIRSADW VVDMGPGAGL HGGEIVAEGP PDAIARAPTS LTGRYLAGDL RIEVPTTRRQ
SDRFIRLAGC RENNLKSIDA NIPIGVLTVV TGVSGSGKST LIYETLYRAL MQKLHASREP
PGKHGNLAFD DEIDKVIVID QSPIGRTPRS NPATYTKVFD EIRKVFAETK EAKVRGYKPG
RFSFNVKGGR CEACQGDGLI KIEMNFLPDV YVECEECKGA RYNRETLEVK YRGKSIADVL
DMSVEEAMDL FENVPSIRNR LDTLSRVGLG YIKLGQSSTT LSGGEAQRIK LTRELAKRAT
GKTIYLLDEP TTGLHFHDVK NLIAVLDDLV ARGNTMVVIE HNLDVIKSAD YIIDLGPEGG
DAGGEVVAVG TPEEVALVEG SHTGAFLKEI LKKP
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