| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1308 |
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| Symbol | |
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| ID | 4847311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1290971 |
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| End bp | 1292143 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115999 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_001047220 |
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| Protein GI | 126179255 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.114545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA TGGACGAAAC CATTGGCAAC ACTCCCGGCA GCGAGCACGA CATGCTTACT
CTCCAGATCC AGGACCTGAA GGCACAGATC CTGGACTACA AACTCAAGAA CGAGTTGCTG
GAAAAGGAGC TTCTGCAGCT CCGGAAAGAG AACGCCCAGT TAAAACGGGT GCCGCTGTTT
GTTGCCGCTG TGGTCGATGT ACTTGAGAAC GGCGAAGTGT ATCTCCGGCA GCAGGGCAAC
AACCAGGAAT ACGTCACCGC GGTCAGCGAG AAACTCCACC GCACCCTCAA ACCCGGGATG
AAGGTGGCGG TGAACAACAC CCTCTCCATC GTCAAGACGA TCGGCAACAT CTTCGACGCG
AGAGTCAGGG TCATGGAACT CGACGAGCAG CCGAGCGTGA CGTTCGAGCA GGTCGGCGGC
CTGAAGGAGG AGATCGAGGA GGTCCGGGAA GCGGTCGAGT ACCCGCTCAC GAAGCCCGAG
ATCTACGAGC GCGTGGGCGT CGAGCCCCCG AAGGGCATCC TCCTCTACGG CCCGCCCGGC
ACGGGAAAGA CCCTGATTGC AAAGGCGGTT GCCCGCCAGT CCCAGGCACG GTTCATCAGG
ATGTCCGGGA GCGAACTCGT CCACAAGTAC ATCGGGGAAG GGGCGCAGCT CGTGCGCGAG
CTCTTTATCC TCGCCCGGGA GCGCGCCCCG GCGATCGTCT TCATCGACGA GATCGACGCG
ATCGGGAGCA TGCGAACGAA CGACGGGACC TCCGGGAGCG CCGAGGTCCA GCGGACGCTG
ATGCAGCTCC TGGCCGAGAT GGACGGGTTC GGGAACCGCG GCAATATTCG GATCATGGCG
GCGACGAACC GGATCGATAT GCTTGACCCG GCCCTCCTCC GCCCCGGCCG GTTCGACCGG
ATCATCGAGG TTCCGCTGCC CGATGCCGGA GCACGCCTCG AGATCTTAAA GATCCACACC
GCGAAGATGT CGCTTGCCGG GAGCGTTGAC CTCCCCTCAC TTGCGGAGCT CGCCGGAGAC
ACCACCGGCG CCGAGCTGCA GGCGATCTGC CGCGAGGCCG GGATGATGGC GATCCGGCGG
GATGCCGATG CCGTCGAGCG CGAAGACTTC CTCGCGGCAA TAAAGAAGGT GAAGCGCGAG
ACGGCGGCGC CGGACAGCCG CATGTATCTC TGA
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| Protein sequence | MSDMDETIGN TPGSEHDMLT LQIQDLKAQI LDYKLKNELL EKELLQLRKE NAQLKRVPLF
VAAVVDVLEN GEVYLRQQGN NQEYVTAVSE KLHRTLKPGM KVAVNNTLSI VKTIGNIFDA
RVRVMELDEQ PSVTFEQVGG LKEEIEEVRE AVEYPLTKPE IYERVGVEPP KGILLYGPPG
TGKTLIAKAV ARQSQARFIR MSGSELVHKY IGEGAQLVRE LFILARERAP AIVFIDEIDA
IGSMRTNDGT SGSAEVQRTL MQLLAEMDGF GNRGNIRIMA ATNRIDMLDP ALLRPGRFDR
IIEVPLPDAG ARLEILKIHT AKMSLAGSVD LPSLAELAGD TTGAELQAIC REAGMMAIRR
DADAVEREDF LAAIKKVKRE TAAPDSRMYL
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