Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_1298 |
Symbol | |
ID | 4847583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 1281621 |
End bp | 1282889 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640115989 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001047210 |
Protein GI | 126179245 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.873683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGTCC GCGTCTCGCA GACCGGCCCG GTCGACGCGG CGTTTCCGGC GCCGCCCTCC AAGAGTTACA CCCACCGGGC GCTGATCGCG GGAGCGCTCG CCTTGGGAAG AACGCGAATC GCACGGCCGC TCCGGGCGGC CGATACAGAA CTGACCGCCC GGGGGCTCGA AGCCCTCGGG GTGCCGCTCG AGTGGCTGCC GGGGGAGATC GCCGTCGCCG GCTGCAGCGG CACCTTCCCG GCGGCGGGAG AGGTCACCAT CGACTGCGGG AACTCCGGGA CGACGCTGCG GCTCCTCACC TCGGCGGCGC TCCTCTCGCA GCACCCGGTG GTGCTGACGG GGAGCCCACG GATGCTCGAG CGGCCGGTCG GCCCCCTTGC GGGGGCGCTC CGGGCCCTCG GGGGTGACGT CGCGTTCACC GGTCAGCCCG GCTACCCGCC CATCCGCATC TCCGGGAGAC TCCGGGGCGG GAGGGCGACG ATCGACGGAA GCATCAGCAG CCAGTTCGTC TCGTCCATCC TGATGGCGGC GCCCTACGCA GAGGAGGACG TGGAACTCAC GCTCCCGGCG ACCCCGGCCT CGCGGTCGTA TCTCGACGTG ACCGCGGACG TGATGCTCCG GTTCGGTGCG CATATCGAGC GGCAGGGCTA CGACCGGTTC CGGGTGGAGA GCGGTAGAGC CTACCGGGGG AGGGATTACC GGGTCGAGGG CGACTACTCC TCGGCCTCCT ATCTCTTCGC GGTCGCGGCC GTCTGCGGCG GGAGGGTCGC GGTCACGGGC CTGAACCCGA CTTCCGTCCA GGGCGACCGC CGGTTCCTCG ACGCCCTCGA GGCGATGGGG TGCAGCGTCG CCGCCGGCAC CGACGCAGTG ACGGTGGAGC GGACGGGCGA TCTCAAAGGC ATCGAGATCG ATATGTCCTC GTCCCCCGAC ACCGTCCAGA CGCTCGCGGC GGTGGCGGCG ACGGCAGGGT CGCCAACGAC GATCACCGGG ACGGCGCACC TGCAGTACAA GGAGAGCGAC CGCGTCGGGG TGACGGCGGA CACCCTCCGG CGGATGGGTG CGGGGGTCGA GGTCACGGAG GATTCCCTCA CGATCACGCC CGCGCCCCTC CACGGGGTGG CCGTCGACCC GCACGACGAC CACCGGACGG CGATGGCGTT TGCCGTGCTC GGGCTCGCGG TCGGGGGGAT GGCGATCCGT GACCCCGAAT GCGTGGAGAA GTCGTTCCCC GGGTTCTGGG AGGCGCTCTA CGGGGAGGGG CTGCTGTGA
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Protein sequence | MIVRVSQTGP VDAAFPAPPS KSYTHRALIA GALALGRTRI ARPLRAADTE LTARGLEALG VPLEWLPGEI AVAGCSGTFP AAGEVTIDCG NSGTTLRLLT SAALLSQHPV VLTGSPRMLE RPVGPLAGAL RALGGDVAFT GQPGYPPIRI SGRLRGGRAT IDGSISSQFV SSILMAAPYA EEDVELTLPA TPASRSYLDV TADVMLRFGA HIERQGYDRF RVESGRAYRG RDYRVEGDYS SASYLFAVAA VCGGRVAVTG LNPTSVQGDR RFLDALEAMG CSVAAGTDAV TVERTGDLKG IEIDMSSSPD TVQTLAAVAA TAGSPTTITG TAHLQYKESD RVGVTADTLR RMGAGVEVTE DSLTITPAPL HGVAVDPHDD HRTAMAFAVL GLAVGGMAIR DPECVEKSFP GFWEALYGEG LL
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