| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1291 |
|---|
| Symbol | |
|---|
| ID | 4847299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | + |
|---|
| Start bp | 1272332 |
|---|
| End bp | 1272886 |
|---|
| Gene Length | 555 bp |
|---|
| Protein Length | 184 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640115982 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001047203 |
|---|
| Protein GI | 126179238 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0600797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATAC CCACCCCGGC GGAACTTCGG GAAAAACGAC TTCGAATGGG CTTAAAGCAG
GCCGATGTGG CCCGTATGGC CGGAATCAGC CAGTCCATGG TCGCGCGGAT CGAGGCAGGC
AGCGTGGACC CGAGGGTGAG CACGCTCGCC AAGATCGTGG ACGTCCTGCG GGCAGCGGAG
CACTCGGCGA TCACGGCGGC CGATGTGATG CACACCCCGG TGCTCTCCGT CGCCCCGGAC
GATCCTGTCG GCCGTGCCGT CGAGATCATG GGCACAAACG GTATCTCCCA GCTGCCGGTG
CTCGAGAAGG ACGTGCCCGT CGGGTGCATA TCCGAATCGG CTATCATGAA CGCCATGGAA
GAAGGAGGGC TCCACCATAC GCACCGGAGA CTGGTGCAGG ACTACCTGGA GCCCGGGTTC
CCGACAGTTC CCCCGACGGC GCCGATCGAC ACGGTCGTCC ACCTCCTGCA CCACAGCCAC
GCGGTCGTCG TTATCGAGAA GGGGAAGGTG CAGGGCGTGA TCACCAAGCA CGACCTGATA
TCGTTGATCA CCTGA
|
|---|
| Protein sequence | MEIPTPAELR EKRLRMGLKQ ADVARMAGIS QSMVARIEAG SVDPRVSTLA KIVDVLRAAE
HSAITAADVM HTPVLSVAPD DPVGRAVEIM GTNGISQLPV LEKDVPVGCI SESAIMNAME
EGGLHHTHRR LVQDYLEPGF PTVPPTAPID TVVHLLHHSH AVVVIEKGKV QGVITKHDLI
SLIT
|
|---|
| |