| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1282 |
|---|
| Symbol | |
|---|
| ID | 4846778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1263581 |
|---|
| End bp | 1264924 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640115972 |
|---|
| Product | glutamate synthase (NADPH), homotetrameric |
|---|
| Protein accession | YP_001047194 |
|---|
| Protein GI | 126179229 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
|---|
| TIGRFAM ID | [TIGR01316] glutamate synthase (NADPH), homotetrameric |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGACC GGCCGGCCGA CGTCCGGATC AAGGACTTTG GGGAGGTCGA CTGCGGCCTC
TCCGCCGAAG AAGCCGTCGC CGAGGCGGAG CGGTGCCTGC AGTGCAAGAA ACCCTTCTGC
GTAACGGGCT GTCCGGTCAA CATCGACATC CCTGCGTTCA TCGGGCATGT CGCGGAGGGG
AACTTCCCCG CGGCCGCACG GGCGCTCAAG GAGCAGAACA TGCTCCCGGC CATCTGCGGG
CGTGTCTGCC CGCAGGAGAC CCAGTGCGAG GGCGTCTGCA TCCTCGGCAA CAAGGAGACC
CCTATCCGGA TCGGCGCGCT CGAGCGGTTC GTGGCCGACC GGGAGCGGGA GAACGACCCC
ACCCTCCCCG ACGTGGCGAA GCCGACCGGG AAGCGGGTGG CGATCGTGGG CTCCGGTCCC
GCAGGGCTGA CGGCTGCGGC CGAGCTCGCC CGTGCCGGCC ACGCCGTCAC GATCTATGAA
TCGCTCCACG AGGCCGGCGG CGTCCTGACC TACGGCATCC CCGCATTCCG GCTCCCGAAA
GACGTCGTCA GGGCAGAGAT CGACCAGGTT CTCGCCCTCG GCGCCCGGCT GAAGAAGAAC
CACCTCGTGG GCCGGAGCGT CAGCGTCGAC GAGCTCCTCG CTTACGATGC GGTCTTCCTC
GCGACCGGGG CGGGGCTCCC CGCGTTCATG TGCATCCCCG GCGAGAACTT GAGCGGTGTC
TACTCGGCAA ACGAGTTCCT CACAAGGGTG AACCTGATGC ACGCCGAGGC GTTCCCCGAG
TTCGACACGC CGGTCATGCA CGGAGCCCGC GTCGCGGTGA TCGGCGGCGG AAACGTCGCG
ATGGACTCCG CCCGGGTGGC ACGCCGCCTG GGGGCGAAGG TCTCGCTCGT CTACCGGCGC
GGCGAGGAGG AGATGCCGGC ACGGAGGGCC GAGGTTCTGC ACGCACAGGA GGAGGGGATC
GAGTTTTACA CCTGCACGAA CCCGACCCGG ATCCTCGGCG AGCAGTGCGT CGCGGGGATC
GAGTGCGTGA AGATGTCGCT CTGCGGCATC GATGCAAGCG GCCGCCGGTC GCCGAAGCCG
ATCGAGGGGA GCGAGTTCAC CCTCGACGTG GACATGGTCG TCCAGGCGAT CGGCACGAGC
CCGAACCCGC TCCTCGTCTC CCTGATCCCG GGGCTCGAGC GCGGGCGGAA GGGCAACGTT
GTCGTCGACG AGAACGGCCG GACGTCCATC CCCCACGTCT ACGCCGGCGG GGACATCGCC
ACCGGCGCAG CGACGGTGAT CGAGGCGATG GGCTCGGCGA AGAAGGCGGC CGCGGCGATC
GACGCGATGC TGAAGGGAGA GTAA
|
|---|
| Protein sequence | MSDRPADVRI KDFGEVDCGL SAEEAVAEAE RCLQCKKPFC VTGCPVNIDI PAFIGHVAEG
NFPAAARALK EQNMLPAICG RVCPQETQCE GVCILGNKET PIRIGALERF VADRERENDP
TLPDVAKPTG KRVAIVGSGP AGLTAAAELA RAGHAVTIYE SLHEAGGVLT YGIPAFRLPK
DVVRAEIDQV LALGARLKKN HLVGRSVSVD ELLAYDAVFL ATGAGLPAFM CIPGENLSGV
YSANEFLTRV NLMHAEAFPE FDTPVMHGAR VAVIGGGNVA MDSARVARRL GAKVSLVYRR
GEEEMPARRA EVLHAQEEGI EFYTCTNPTR ILGEQCVAGI ECVKMSLCGI DASGRRSPKP
IEGSEFTLDV DMVVQAIGTS PNPLLVSLIP GLERGRKGNV VVDENGRTSI PHVYAGGDIA
TGAATVIEAM GSAKKAAAAI DAMLKGE
|
|---|
| |