| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1213 |
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| Symbol | |
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| ID | 4848443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1191804 |
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| End bp | 1195889 |
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| Gene Length | 4086 bp |
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| Protein Length | 1361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115903 |
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| Product | Ig domain-containing protein |
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| Protein accession | YP_001047126 |
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| Protein GI | 126179161 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.406135 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAC GCACGTATCT GACGCTGCTT TGTGCAGTCG TCATCGTCGG GCTGCTGGCG
TCGCCGGTTA TGGCGGCAAA GATTGCTCCG GGAGAACTGG TACCCTTTGC CGTCTTCCCC
GGGTCGCAGG AGAACCCCGA CGTCGACGGG AACATGGTCG TCTGGGAAGA CGGCCGGAAC
GGAAACAAGG ACATCTACTT CTCGGATACA CCCGGTTATA CCGGCGACCG GATAACCAGC
GATCCCGCCT CGCAGGAGAG GCCGTCCATC TCGGGTGACT ACATCGTCTG GCAGGACGAC
CGGAACGGGG ACTGGGATAT CTACCTCTAT CAGCGCTCGA CGGGTGAAGA AACACAACTC
ACCGACGACA CAGGCGACCA GTGGCTGCCG ATCGTCCGCG GGAACTACGT TGCCTGGTAC
GACGACAGCA GCGGCGATAC CAACATCGTC CTCTACGACA TCGCCGCCGG CAGCGTGAAA
GATGTCATCG AGTGCGACGC GAAGACAACG ATCCCCGGCG GGAGCACCGA GTTCAAGCCC
GCACTCTCGG AGAAGTACGT CGCCTGGGTC GAAGAAGCAG ACGAAAGGGT TCATTACTAC
GACATCGCCG CCGGTGAGAT GAAAGGGCCG GTATCCGCGA ACACAGCGAT TCAGTCCTGG
CCCTCGCTCT ACGGGGGCAT CATAGCCTGG GAGGATAACC GGAATGCGAG CCCCGACATC
TACATGACCA ATCTCGACGA CCCGTTCGAA GGGGAGCATA GGATCACCTC CGACGGCTCC
GAACAGGTTG CGCCGGCGCT CACCGGACAG ATAGTCGCGT GGGAGGACAA GCGGGACGCA
CCGAGAAGCA TCTACATGTA CGACCTCAGC CACCTCCCCG ACGGTGAGGA GATGGCCGTA
CCCACCGCCG GCGGCGAACA ACTCTACCCC GCCGCCAGCG GAAACATGAT CGTCTGGCAG
AAAGCCCGCG ATACCACCTC AGACCTCTAC GCGTTCATCT ACGATCCCGA AGGAGAGCCG
GGCGTGGTCG CGAGGATCGA GGTTGAACCG TCTGAAGCTA CGCTGGATAT CAGCGATGAG
ATGAAGTTCA ACGCCACCTG CTACGACGAG AACGATGAAG CCATGCCCAA TCTGGAGGTC
TCCTGGTCGT GCGACAACGG AACCGTCGGA TTCGTCGATT CCGGCGGCTA CTTCATTGCT
TACGAAGCAG GCACGACGAC CGTCGTCGCG TCGGCTGGCG GCATCACCGC AACCGCGACC
GTCACGGTCA TCGATGATGA GCCTGAACTG ACGAGCATCA CGGTCAAACC GACCACCGTC
ACGCTCGCGG TCAACGGCAC GCAACAGTTC GCGGCAACCG CTTTTGACCA GTTCGGAGAA
GAGATGACCG GCGTTGCGAT CGACTGGTCG TGCAGCGACG AGACCGTCGG CGAGATCGAC
ACGGACGGTA TCTTCACCGC TCTCACCAGC GGCACCGCGA CCGTCACCGC GTCCGCAGGC
GACGTCACCG GAACGGCGGC CGTCACCGTC AGCACCGAAA CGCCGGTCGC AGATACCATC
GCGATCGAAC CGCCCACCGC CACGCTCAAG GTCGACGCCA CACAGCAGTT CACGGCAACC
GTCCGCGACC AGTTCGGCGG CGAGATGGCC GGTGTTGCGG TCGACTGGTC GTGCAGCGAC
GAGACCGTCG GCACCATCGA CACGGACGGC CTCTTCACCG CGAAGACCGA AGGCACCGCA
ACCGTCACCG CGACGGCCGG GGAAGCCTCC GGAACCGCGG GCGTCACCGT CAGCACAGAT
GACCCCGGCG AACAGGTGCT CACGAACATC ACGGTCACGC CGTCCCGGGC CACCCTGGAC
GTCGACGACA TCCAGAGATT CATCGTGACG GCCTATGACC AGAACGGCAA CACCATGTCC
GCCGGTGAGA TCGCCTGGTC GTGCAGCGAC GAGGGCGTCG GCACCATCGA CGCGAACGGA
TGCTTCACCG CCCTTGCCGC GGGTACGGCG ACCGTAACCG GAACGGCAGG CGACTTCTCC
GAGGCCGCGA CCATCACTAT CAGCGAATGC CCTGCGCTCG CAAAGATCGC GGTCGTGCCG
TCCGCGGCCA CGCTCGAGGT CGGCGACGAA CTGGAGTTCG ACGCCGTCGC GTTCGACCGG
TCCGGTAAGA TCGTCGAGGA CGCAAGAGTA ACCTGGGAGT GCAGCGACGA GTGCGTCGGC
ACCATCAACG AGTGCGGCGT CTTCACCGCT CTCGCCGCGG GCACGGCGAC CATCACCGCA
TGCGGAGACT GTGCCGAAGG AACCGCAACC GTCACCGTGA ACTGTGACGA CCCGGTCCTC
TCCAGCATCG TCGTCACCCC GGCGGCAATC ACGCTCGCCG AAAATGACAC CGCGACGTTC
ACCGCGACCG CTCTCGACCA GGACGGCTGC GAGATGCCCG ACATCGAGAT CAACTGGTCG
TGCAGCGATG AGACCGTCGG CGAGATCGAC GATACCGGGT TCTTCGCGGC TCTCGCCGCG
GGCACCACGA CCGTTATCGC TTCGGCAGAC GGCGTCAACG GGACGGCGGA CGTAGAGGTC
ACCAATGAAT CCGCAGGTGT CGTGGTCTCC CCGTCGGCGA TCATCCTGGA TCCCGGGGAC
GAGTGGCAGT TCACCGCGAC CGTGTATGAC CTGCAGGACA ATGCAGACGC GTATGACTTG
CAGGACAACG TAGGTTCTAC CGTGACCTGG TCGTGCGCCG ACCCGGAGAT CGGCGAGATC
GACGCAGACG GCCTCTTCAC CGCTCTCGCC AGCGGCACCA CGTCCGTCAC CGCAACCGTT
GACGGAGAGA ACGAGACCGC GACCGGAACC GCGGCGGTGA CCGTCAGCTC GACGGCACCG
GAACTTACGC GGATCGAGGT CAGCCCGCCC GACTTCTGCA TCCCTGCCGG GAACTGCCTG
GCGCTCACCG CCAGGGGATT CGACCAGTAC GGTCTTCCCA TGGACGCCAA TGTGACCTGG
GAGAGCAGCG ATCCGTGCGT CGGCACCATC AACGAGTGCG GCGTCTTCAC CGCGCTCTGC
GACGGCGAGG TGCAACTCAT CGCATCGGCC GACGGAGTCT GTGGCTCCGC CTGCGTGACC
GTTCTGCCCT CGCTCCCGGT TCCGGCCTGC ATCGAGGTCG AACCGCTTGA AGCCACGCTC
ACGGCCGGAG GAACCCGGGA GTTCACGGCC ACGGTATTCG ACCAGTGCGA CAACGAGATG
GACTGGGTCA GGGTAGCCTG GTCGTGCTCC AACGACGATG TCGGCACGAT CGACCGGGCC
GGCCTCTTCG CAGCGTTCTC GCAGGGCTTC ACGCACGTGA CGGCGTGTGC CGGCGGCGTT
GAAGAAACGG CATCGGTCAC CGTCACGGCG GCGCCCACGA TCGATCCCAC GCCAGGGAAC
AACGGCGGAT CGACCGGAAG CGCCTCAAGC GACGGCGGCG GCGATACCGG CCCCACCTTC
TTCGCAGGGG CCTGCGAGGA CCTGAAGGGC GGCGAGACGC ACACGTTCTC GGGTATCGAC
ATCACGTCGA TCGGCAGCAT CGCCATCACG GCGTCCGACA ACATCCCGAA GCTGCTGCTG
ACCGTGAAGG AGACGGGGTG CCCCAACCCG GCGTCGCCTC CCGGCGGCAG CACCTACGAG
TACGTCGAGA TCAGCCTCTC GTGGGCGAAC CCGAACCAGA TCGGCGGCGC GACGTTGACC
TTCATCGTCC CGGCGAAGTG GCTCGAGGAG CACGGCATGC TCCCGGAGGA TGTCAGGCTC
ATGCGCTACG TCGACGGCGG ATGGCAGATC CTGGAGACCG AGGTCATCGG TGAAGAGAAC
GGGAATTACC ACTTCCAGGC GACCACCCCC GGGTTCTCCA CCTTCGCCAT CGCCGCAATG
CCGGAGAACG CGACCATGAC GACGGAGACG AACGTCACGA CGGAGGCTAC CGGGACGCCC
GAAGGGGCGG AGACGATGAC GACCGAACCA CCCGTCGCAG CGACGACGAC GCCTGCAGCA
CCGCTCGTCT ACGCACCCTT CCTCGCGCCG CTGGCCTTCC TCCTCTGGGC GAGAAAGAAC
CACTAA
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| Protein sequence | MKKRTYLTLL CAVVIVGLLA SPVMAAKIAP GELVPFAVFP GSQENPDVDG NMVVWEDGRN
GNKDIYFSDT PGYTGDRITS DPASQERPSI SGDYIVWQDD RNGDWDIYLY QRSTGEETQL
TDDTGDQWLP IVRGNYVAWY DDSSGDTNIV LYDIAAGSVK DVIECDAKTT IPGGSTEFKP
ALSEKYVAWV EEADERVHYY DIAAGEMKGP VSANTAIQSW PSLYGGIIAW EDNRNASPDI
YMTNLDDPFE GEHRITSDGS EQVAPALTGQ IVAWEDKRDA PRSIYMYDLS HLPDGEEMAV
PTAGGEQLYP AASGNMIVWQ KARDTTSDLY AFIYDPEGEP GVVARIEVEP SEATLDISDE
MKFNATCYDE NDEAMPNLEV SWSCDNGTVG FVDSGGYFIA YEAGTTTVVA SAGGITATAT
VTVIDDEPEL TSITVKPTTV TLAVNGTQQF AATAFDQFGE EMTGVAIDWS CSDETVGEID
TDGIFTALTS GTATVTASAG DVTGTAAVTV STETPVADTI AIEPPTATLK VDATQQFTAT
VRDQFGGEMA GVAVDWSCSD ETVGTIDTDG LFTAKTEGTA TVTATAGEAS GTAGVTVSTD
DPGEQVLTNI TVTPSRATLD VDDIQRFIVT AYDQNGNTMS AGEIAWSCSD EGVGTIDANG
CFTALAAGTA TVTGTAGDFS EAATITISEC PALAKIAVVP SAATLEVGDE LEFDAVAFDR
SGKIVEDARV TWECSDECVG TINECGVFTA LAAGTATITA CGDCAEGTAT VTVNCDDPVL
SSIVVTPAAI TLAENDTATF TATALDQDGC EMPDIEINWS CSDETVGEID DTGFFAALAA
GTTTVIASAD GVNGTADVEV TNESAGVVVS PSAIILDPGD EWQFTATVYD LQDNADAYDL
QDNVGSTVTW SCADPEIGEI DADGLFTALA SGTTSVTATV DGENETATGT AAVTVSSTAP
ELTRIEVSPP DFCIPAGNCL ALTARGFDQY GLPMDANVTW ESSDPCVGTI NECGVFTALC
DGEVQLIASA DGVCGSACVT VLPSLPVPAC IEVEPLEATL TAGGTREFTA TVFDQCDNEM
DWVRVAWSCS NDDVGTIDRA GLFAAFSQGF THVTACAGGV EETASVTVTA APTIDPTPGN
NGGSTGSASS DGGGDTGPTF FAGACEDLKG GETHTFSGID ITSIGSIAIT ASDNIPKLLL
TVKETGCPNP ASPPGGSTYE YVEISLSWAN PNQIGGATLT FIVPAKWLEE HGMLPEDVRL
MRYVDGGWQI LETEVIGEEN GNYHFQATTP GFSTFAIAAM PENATMTTET NVTTEATGTP
EGAETMTTEP PVAATTTPAA PLVYAPFLAP LAFLLWARKN H
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