| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1054 |
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| Symbol | |
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| ID | 4848001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 1040724 |
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| End bp | 1042223 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640115742 |
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| Product | 4-alpha-glucanotransferase |
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| Protein accession | YP_001046969 |
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| Protein GI | 126179004 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1640] 4-alpha-glucanotransferase |
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| TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00164715 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAGA CACGGGGGAG CGGCATACTC CTGCATATCA CGTCCCTGCC GTCACCGTAC
GGCGTCGGCG ATTTCGGTCC GGCGGCATAC CGGTTCGTCG ATGCGCTTGA GCGGGGCCGG
CAGCACTACT GGCAGATCCT GCCGCTCAAC CCGACAGAGA CGGCATACGC CCACTCCCCC
TACTCGAGCC CGTCGGCGTT CGCCGCAAAC ATCCTCCTCA TCAGCCCCGA GATGCTCGTC
CGGGAAGGCT ATCTCAGGAA GAGCGAACTG GAGCCGGCGC CCGGGTTCCC GGAGGAGCGG
GCGGCGTACG AGGCGGCCGC ATGGTACCGG GAACGGCTGT TCGCGGCTGC CTACGAGCGG
TTCCGCCACT CCGGGCCGGA TCGCAGGTTC GAGACGTTCT GCGACGGCAC GGGATGGTGG
CTCGACGACC ACGCGCTCTT CGTCGCGTTA AAAGGCCATT TCCGCGGGCA GGCGTGGAAC
CGGTGGCCGG AGGATATCCG GGCAAGGGAA ACGGGAGCCC TCAAAGAGAT GCGCGAACTG
CTCGACGACC GGATACGAAA AGAGAAGTTC CTCCAGTACA TCGCCGCCCG CCAGTGGTCG
GCCCTCCGGC GCTACTGCAC CGAACGGGGC ATCCAGGTCA TCGGCGACAT CCCGATCTAC
GTCGCGTATG ACAGCGTCGA CGTCTGGGCG CACCCCGGGA TCTTCAAACT GGACGAAGAC
CTCCGCCCGA CCGTGGTGGC GGGGGTGCCG CCAGATATCT TCAGCAGGAC CGGGCAGCTC
TGGGGGAACC CGGTCTACGA CTGGGCCGCA CTCCGGGAGC GCGGTTACGA CTGGTGGGCG
GGCCGGATCG CCCGGTCCGC CGAACTCTAC GACCTCTTCC GGATCGACCA CTTCCGGGCA
TTCGCCGACT ACTACGAGGT TCCGGCGGGC GACGCGACGG CCGAGCGCGG CACCTGGGTC
GACGGGCCGG GAGAAGACTT CTTCGAGGCG CTCGCCCGAA AGCACCCCTG CTTTCCTATC
GTCGCCGAAG ACCTGGGGGC GAACACCCCC GCCGTCCAGG CCCTCCTCGA CCGGTTCGAC
TTCCCGGGGA TGAAGATCCT CCTCTTCGCG TTCGGCGAGG GGATCGCAAG AACCCCCCAT
ATCCCGCACA ACTACGTCCA TAACCTCATC TGCTACACGG GGACGCACGA CAACAACACC
GCACGGGGAT GGTTCGAGGA GGAGGCGTCG GAGGAGGATA AGGAGAGGTT CTTCACCTAT
ATCGGGCGGG AGGTGGCGGC GGACGAGGTT CACCGGGAGC TCGTCCGGCT GGCGATGACC
TCGGTCGCCC GGGCGTGCAT CGTCCCGATG CAGGACGTCC TCGGCCTCGG TGCCGCGGCA
CGGATGAACT ACCCCTCGAC CACCACGGGG AACTGGGTGT GGCGGATGAC GCCGGAGGAG
TTCGCCGGTG CGCCGTTCGA GTGGCTCAGG GGGCTTACGG AACTCACCGG ACGGGGGTGA
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| Protein sequence | MIQTRGSGIL LHITSLPSPY GVGDFGPAAY RFVDALERGR QHYWQILPLN PTETAYAHSP
YSSPSAFAAN ILLISPEMLV REGYLRKSEL EPAPGFPEER AAYEAAAWYR ERLFAAAYER
FRHSGPDRRF ETFCDGTGWW LDDHALFVAL KGHFRGQAWN RWPEDIRARE TGALKEMREL
LDDRIRKEKF LQYIAARQWS ALRRYCTERG IQVIGDIPIY VAYDSVDVWA HPGIFKLDED
LRPTVVAGVP PDIFSRTGQL WGNPVYDWAA LRERGYDWWA GRIARSAELY DLFRIDHFRA
FADYYEVPAG DATAERGTWV DGPGEDFFEA LARKHPCFPI VAEDLGANTP AVQALLDRFD
FPGMKILLFA FGEGIARTPH IPHNYVHNLI CYTGTHDNNT ARGWFEEEAS EEDKERFFTY
IGREVAADEV HRELVRLAMT SVARACIVPM QDVLGLGAAA RMNYPSTTTG NWVWRMTPEE
FAGAPFEWLR GLTELTGRG
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