Gene Memar_1046 details

Gene Information

• Locus tag: Memar_1046
• ID: 4846923
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanoculleus marisnigri JR1
• Kingdom: Archaea
• Replicon accession: NC_009051
• Strand: +
• Start bp: 1031713
• End bp: 1032354
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 640115734
• Product: formylmethanofuran dehydrogenase, subunit E region
• Protein accession: YP_001046961
• Protein GI: 126178996
• COG category: [C] Energy production and conversion
• COG ID: [COG2191] Formylmethanofuran dehydrogenase subunit E

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.901443
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCAACCGA GACTGAATCA CACATGGGAA GATATCGAGG CCCGGCTCGA GTCGAGAGGC 
TCCCCCCCGG GATTGATCGA GGACTTCAAA CGATGCATCG ATTTCCACAC CTTCGCGGCC 
CCCGGGCTCC TGGTCGGGGT CTTCATGGTG GATCAGGCCC TGGAACTCCT GAACCCTCCT 
GAGGGTGAGA AGATCTACGC TGTCTGCGAG ACCACCAAGT GCCTGCCCGA CGCCCTTCAG 
GTGATTGCCC ACTGCACGAC CGGCAACCAC CGCCTCCGGG TGATCCCGAT CGGGAAGTTT 
GCCATCACCA TGAACGGGCC GGCCGATTCC CCGTACGTAA ACGGGATCCG GGTCTTCGTC 
GACGGCGATA AGATCGAGCG TTATCCGACG TTCGCTCTCT GGTACACCAA AGACCCGCTC 
TTCGACCCGA GAACCCGGGG TATCGACCTG ATCGACGAGG TCATCGATGC GGGACGCGAT 
CTCCTCTCGC ACGAGCGGGT GCGGGTGAAA GTGCCCCAGA AATGGCCGTG GAAGTCCGCG 
ATCTGTTCCA TCTGCGGCGA GATGGTTCCC GACAACCTGC TCGTCGACGG TGCCTGTACC 
GACTGCCGAT CACAGTCCTA CTACGAGAAG GTAGCGTACT GA 

 

Protein sequence

MQPRLNHTWE DIEARLESRG SPPGLIEDFK RCIDFHTFAA PGLLVGVFMV DQALELLNPP 
EGEKIYAVCE TTKCLPDALQ VIAHCTTGNH RLRVIPIGKF AITMNGPADS PYVNGIRVFV 
DGDKIERYPT FALWYTKDPL FDPRTRGIDL IDEVIDAGRD LLSHERVRVK VPQKWPWKSA 
ICSICGEMVP DNLLVDGACT DCRSQSYYEK VAY