| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_1020 |
|---|
| Symbol | |
|---|
| ID | 4846249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 1004448 |
|---|
| End bp | 1005362 |
|---|
| Gene Length | 915 bp |
|---|
| Protein Length | 304 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115707 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001046935 |
|---|
| Protein GI | 126178970 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4866] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0104697 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAAC TGACCGACTT CAAGCCCGTG AGCCTGGACG ATCGCGACCT CTTCCGGGAG
CACTACCGGC AGTTCCCCCA GGTGCACAGC GACAACACGT TCGCGAACAT GGTCTGCTGG
AACCATTACG CCGACTACCG TTTCATAGAG GTCGAAGGTT CGATCGTCCT CTCAAGCACC
ATCGACGGCG TGACGGCGTT TCGCATGCCG ATCGGCCCGA GAAACCCGGA ACTGGTCGGG
GACGTCGTCG ACCTCGCGGC GAGGGAAGGC GGGGATACGC CCCTGTGGGT CCTCGACCCG
GCAAATGAAG CGCTGATCCG GGAACTCTAC CCGGCCCTCC CCCTCCATGC AAACCGGAAC
TTCTTCGACT ACATCTACCG GACCGAAGCC CTCGCCGACC TCGCCGGGAA GGGCTACGCC
ACTATCCGGC GCCAGGTCAA CCGGTTCGGG CGGGAATACC AGTATACGGT CGAGAAGATC
ACGGAGGAGA ACATCAACGA GGTCTGGGAG TTCCTGGTCG TCTGGTGCGA GTGGCGGGAC
TGCGACTCCG AACCGGTTCT TGCCGCCGAG AAAGAGGCCA TCCTCTTTGC CGTGAACCAC
TTCTTCCCCA TCGGGCTTGA AGGATGGATC GTCAGGATCG GCGGCACCAT CGGGGCGATA
TCGATCGTCG GTCCGGTCAA CGAATCTATG GCGGTAGTCC ACTTCGAGAA GGCGCTCCCC
GAGACCTACC CGGGCATTTA CAAGGTGATC ACGACCGAGA CGGCGGCGGG GCTCCGGGAC
CGCTACCGCT ACGTCAACCG CGAGTGCGAC ATGGGCGTGC CCGGGCTCCG CGAATCGAAG
ACGCGTTACC ACCCCGCCTA CATGGTCGAG GTGTACTACG CAACCCGGGA AGATCTGGAG
GCGTGCTGCC GGTGA
|
|---|
| Protein sequence | MLKLTDFKPV SLDDRDLFRE HYRQFPQVHS DNTFANMVCW NHYADYRFIE VEGSIVLSST
IDGVTAFRMP IGPRNPELVG DVVDLAAREG GDTPLWVLDP ANEALIRELY PALPLHANRN
FFDYIYRTEA LADLAGKGYA TIRRQVNRFG REYQYTVEKI TEENINEVWE FLVVWCEWRD
CDSEPVLAAE KEAILFAVNH FFPIGLEGWI VRIGGTIGAI SIVGPVNESM AVVHFEKALP
ETYPGIYKVI TTETAAGLRD RYRYVNRECD MGVPGLRESK TRYHPAYMVE VYYATREDLE
ACCR
|
|---|
| |