Gene Memar_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMemar_0976 
Symbol 
ID4846127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanoculleus marisnigri JR1 
KingdomArchaea 
Replicon accessionNC_009051 
Strand- 
Start bp959265 
End bp959954 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content64% 
IMG OID640115663 
Producthypothetical protein 
Protein accessionYP_001046891 
Protein GI126178926 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0255663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGTCG AGCCGCTGGT AATCCTTGCC CTGGCGCTGG CGCCGGGGGT GTTCTGGGCG 
TGGTACTTCT ACCGCAGGGA CAAATTCGAG CCCGAACCAA AGGCGCTGAT CGTGAAGATC 
TTCCTCCTCG GCGTCCTCGT CACGTTCCCC GTCGCCTTCG TCGAAGGCTT CTTCGGCCTC 
TTCATCGTAT CCCCGCTGAT CATGGGCGCC GTCATCGCGC CCATCGTCGA GGAGTACGGC 
AAGTTTGCGG TTGTGCGCCG GTTCGCCTAT CCAAACACCG AGTTCGACGA ACCGATGGAC 
GGCATCGTCT ACGCCGCCGC CGCCGCCCTC GGTCTCGCAA CGCTCGAAAA CATCCTTTAC 
GTCTTTACGG CATACCTGAC GTCGCCGGCG CTCGCCCTCG GCACGATCGC CGTCCGCGCG 
ATCTTCTCGG TTCCGGGGCA CGCGCTCTTT GCCGGCGTAT GGGGCTACGC CCTCGGCCGG 
GCCAAGTTCA CAGCCGCCGA ACGCCGGCCG ACGATCGTCC TTCAGGGACT TCTGCTCGGG 
ATGGTGCTGC ACGGCATCTT CAACTTCCTG CTCTTCTCCG CCGAGATCTT CGCCTACGCC 
ATGGCCGTCT TCATCCTGGT CCTGACGCCG GGGCTCTGGA TCCTTGCGAA CCGAAACATC 
AGGCGGGCGC TCGACCACGG ACACCGGTAG
 
Protein sequence
MVVEPLVILA LALAPGVFWA WYFYRRDKFE PEPKALIVKI FLLGVLVTFP VAFVEGFFGL 
FIVSPLIMGA VIAPIVEEYG KFAVVRRFAY PNTEFDEPMD GIVYAAAAAL GLATLENILY 
VFTAYLTSPA LALGTIAVRA IFSVPGHALF AGVWGYALGR AKFTAAERRP TIVLQGLLLG 
MVLHGIFNFL LFSAEIFAYA MAVFILVLTP GLWILANRNI RRALDHGHR