| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0949 |
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| Symbol | |
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| ID | 4846020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 930758 |
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| End bp | 932611 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640115635 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001046864 |
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| Protein GI | 126178899 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0134957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATCGG CGCTGGAAGC AACGGTAACC CTCCCCTTCG AGCCCGAGTT CATCGACGAG
GGGAACGACT GCTACAACAA CGTGGAGTCC TGCGCACTCT ACCGGATGCT CCCGGCAAAC
GCCCGCGACT ACGTCAAGGC GAGCCCCCAC CTGCTCGAGT ACCTCCACAT CCTGCCGGTC
AACACCGTCG GCATCCCGCT CTTCCTCTCG GAGCTGAAGC GGGACTTAAA ATCGATGGAG
AACCCGAACA TCATCTACCC GGTGAACGAG ACGACGTTCA TCCACATCTT CCCGGACCCG
AACGACGTCC GGAACTGGTA CATCCCGATC GAGCCGGCAT TTCTGCACTC TGTAAAAGAG
ATCCTCCCGG TGATCGAGGA GAAACTGATC GATATGATCG ATGCCCTCGA GGAGGAGCCG
GTGACCGAAA AGGCACGGAT CGGGGTGCTG AAGAATTTCA TCCAGCAACT CGTCTACATC
AAGAAGCCGG GCGAGGTGAT CGACAAGTCC CTGCTTGCCG GCGGGAAATC GAAAGACCTC
AAACTCCGGA TCAAGACCTT CCTCACCTCC GAGATCGGCG CGCCGAAGCG ACCGCAGGTT
TCGGGGCGCC AGGAACTTGC CGACGGGCGG ATCATCCTCA CGCAGCAGGA GTACAAGGCG
CTCGAGTACA TGATAATCCG CGACAAGATC GAGATGGGGA CGCTCAAACC GTTTCTCTCC
GACAGGTATA TCGAGGATAT CACCTGCGAC GGCGTCGGGC CGATCTTCAT CGAGCACAAG
ATCTTCAAAG GGTTGAAATC GGTCATCGGG TTTCGGGACT CCCAGGAACT CGACAACTTC
GTCGTCAAAC TCGCCGAGCG AATCAAACGG CCGCTGACGT ACAGGAACCC CATCGTGGAC
TCGACCCTCC CCGACGGCTC GCGTATCAAC ATCGTCTACG GAACCGAGAT CAGCAAGCAC
GGAAGCAACT TCACCATTCG TAAGGTGAAC GAAGTGCCGC TGAGCATCCT GCAGGTCATC
GAGAGCGGGG CGTGCGACTA CATGATGGCC GCCTACCTCT GGATCTGCCT TGAGTACGGG
ATGTCGATGT TCGTCTCCGG TGAGACCGCA AGCGGCAAGA CGACGACGTT GAACGCCCTC
ACGACCTTCC TCCCGCCCGA GAACAAGATC GTCACCATCG AGGATACCCC GGAACTGACC
GTTCCCCACA GGAACTGGAC ACGCGAGGTC GCGAAAGCCA AAGGAAAGGG CGAAGGGGAA
GGCTCCGAGG TCACGATGTT CGACCTCCTC AAAGCTGCGC TGCGTCAGCG CCCGAACCAG
ATCCTGGTCG GTGAGATTCG TGGAGTGGAA GGGTCCGTCG CATTCTCCGC AATGCAGACC
GGCCACCCGG TGATGAGCAC CTTCCACGCA GCGTCGGTCG AGAAACTGAT CCAGCGTCTC
TGCGGCGACC CGATCAACAT CCCCAAGACC TACGTCGACA ACTTAAACCT GGTCATCATC
CAGAGTGCGG TAAAACTCCC CCAGGGGGGA ACCGTGCGGC GGATGCTCAG CGTCAACGAA
CTCGTGGGCT ACGACCCCGA GACGCAGGGA TTCTCCTTCA TGGCGGCGTT CGTCTGGGAC
CCCGCCACCG ACTCCTTCAC CTTTACCGGG AAAGGAAGCA GTTACCTGCT TGAAAACAAG
ATCGCAACGA TGCTCGGCAT CCCCGAGAAC CGGCGGGCCG AGATCTACGA TGAAGTCGAT
AAACGCGCCA AAATTCTTGA ACGGCTTCAC AAGGCCGGGT ACACCCAGTT CTGGGATCTC
TTCCACATGA CCACGAAGAT CAAGAAGCAG GGTCTGCTCA ACATCGAGGT GTAA
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| Protein sequence | MGSALEATVT LPFEPEFIDE GNDCYNNVES CALYRMLPAN ARDYVKASPH LLEYLHILPV
NTVGIPLFLS ELKRDLKSME NPNIIYPVNE TTFIHIFPDP NDVRNWYIPI EPAFLHSVKE
ILPVIEEKLI DMIDALEEEP VTEKARIGVL KNFIQQLVYI KKPGEVIDKS LLAGGKSKDL
KLRIKTFLTS EIGAPKRPQV SGRQELADGR IILTQQEYKA LEYMIIRDKI EMGTLKPFLS
DRYIEDITCD GVGPIFIEHK IFKGLKSVIG FRDSQELDNF VVKLAERIKR PLTYRNPIVD
STLPDGSRIN IVYGTEISKH GSNFTIRKVN EVPLSILQVI ESGACDYMMA AYLWICLEYG
MSMFVSGETA SGKTTTLNAL TTFLPPENKI VTIEDTPELT VPHRNWTREV AKAKGKGEGE
GSEVTMFDLL KAALRQRPNQ ILVGEIRGVE GSVAFSAMQT GHPVMSTFHA ASVEKLIQRL
CGDPINIPKT YVDNLNLVII QSAVKLPQGG TVRRMLSVNE LVGYDPETQG FSFMAAFVWD
PATDSFTFTG KGSSYLLENK IATMLGIPEN RRAEIYDEVD KRAKILERLH KAGYTQFWDL
FHMTTKIKKQ GLLNIEV
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