Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0910 |
Symbol | |
ID | 4846010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | - |
Start bp | 889280 |
End bp | 890773 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640115596 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001046825 |
Protein GI | 126178860 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0303117 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCAGC CGGCCGGCAA CGCCTCGCGG CAGCAGTATA CCCTGCTCAT GGTCTCGATC GCCCTTGCGA TGTTCATGAC GTCGCTTGAC GGCACGATCG TGAACATCGC TCTTCCCACC ATCTCGACGA TCTTCGACCT CCCCTCGACA ACGGTCAGCT GGGTTGCAAC GGCATACCTG CTGGTTCTGA CGGGCTCTAT CCTCGTCTTC GGCAAGGTGG CCGACCGGAT CGGTTTCAAG ACCGTGTTCC TCGCCGGATT CGCCGTCTTT ACGGCAGGCT CGTTCTTCTG CGGATTCTTT CCGGAGGTCT TCGACTCGTT CGGGATGCTG ATCGCTTCAC GGGTTCTCCA GGCGATCGGC GGGGCGATGA TCGCCGCCAT CGCTCCGGCC CTGGTCGCGG CGTTCCTCCC GATGAAGATG AAAGGGAAGG CGATGGGGGT CGTGACCACG TTCGCGGCGT TCGGGACCGC GGCCGGCCCG ATCCTCGGGG GCATCCTGAC GCAGTACCTC TCCTGGAACT GGATCTTCTA TATCAACGTC CCCGTGGGCG CCGCGGCCAT CCTGCTCGGC TCCTATGCCA TACCGGCAGG CGTCACGGCG TCCGGCACGC CCTCGCCGTT CGACCGGCTC GGCGCGGTTC TGATCTTCGC CGGGCTCGGA TCGCTCATAT ATGCCGTCAG CCAGGGTTCC GCGCTCGGGT GGACCGACCC GACGATCCTT GCGGCACTCG CGGCTGCCGT TATCGCGCTC GGCTACCTCG TCCTCCACGA ACGGAGGACG GCCGACCCGC TGCTCGACTT CCGGCTCTTT AGCAACCGCA ACTTCCTCTA TGTCAACCTC ATGCTCGCCC TCGCCTACTT CCTCATGGGC GGCGTCAACT ACCTCCTCCC GTTCTTCCTC GAACTGGTGA AGGGCTTCGA CCCCTCGACC TCCGGGCTCG TTCTCACCGC GCTCTCGTTC GCCATGATGG CAAGCGGCTT CCTCTCCGGG ATGCTCATAA ACCGTGTCGG GAACCGGAGA CTCTGTATCG CCGGCGCACT CGTCATCTCC GCCGGCTACC TGATGTTCCG GTTCTTCTCG GCGGAGAGCA CGATATACTA CATCAGCGGA GCGCTTGCCG CCGTCGGATT CGGGCTCGGC CTCATGCTCT CGCCCGGCAC GAACATGGTG ATGAACATGG CACCCCGCGA CCGGCAGGGC ATGGTATCGA GCCTCATCTC CGTGGAGCGC ACCGGCCCGA TCACCCTCGG CATCTCCTTC ATCAGCATGA TCTTCGTCCA GGCGATGCTC ACGGTCGCGT CGCACCGCCA CGTCACGACG TCGTCCCCGG CGGAGATCAG GATAGACGTG CTTGCCACGG GGTTCGACCT GGTCTTCGTC GCCGTCTTTG CGGTCTCGCT CGCCGTCGTC GCCCTCGCGT TCTTAAGCCG CGACGAGGTT CACGCCGACA ACCGCGAAGA GGAGACCTTC GAGGCCGCGG CCGCCGGGGC GTGA
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Protein sequence | MHQPAGNASR QQYTLLMVSI ALAMFMTSLD GTIVNIALPT ISTIFDLPST TVSWVATAYL LVLTGSILVF GKVADRIGFK TVFLAGFAVF TAGSFFCGFF PEVFDSFGML IASRVLQAIG GAMIAAIAPA LVAAFLPMKM KGKAMGVVTT FAAFGTAAGP ILGGILTQYL SWNWIFYINV PVGAAAILLG SYAIPAGVTA SGTPSPFDRL GAVLIFAGLG SLIYAVSQGS ALGWTDPTIL AALAAAVIAL GYLVLHERRT ADPLLDFRLF SNRNFLYVNL MLALAYFLMG GVNYLLPFFL ELVKGFDPST SGLVLTALSF AMMASGFLSG MLINRVGNRR LCIAGALVIS AGYLMFRFFS AESTIYYISG ALAAVGFGLG LMLSPGTNMV MNMAPRDRQG MVSSLISVER TGPITLGISF ISMIFVQAML TVASHRHVTT SSPAEIRIDV LATGFDLVFV AVFAVSLAVV ALAFLSRDEV HADNREEETF EAAAAGA
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