| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0864 |
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| Symbol | |
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| ID | 4847033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 841049 |
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| End bp | 843256 |
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| Gene Length | 2208 bp |
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| Protein Length | 735 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640115550 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001046779 |
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| Protein GI | 126178814 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.175362 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTCTC CCTCAGAAAA CATACCCGAA TGTTCCTATC CCGCCGGACA GGGCAAAACG
GCGCCGGAAA TCTCCGGAGA GGTCGAACAG TGTGTTCGAG AGCGGTTGCA GGAGTTCCAA
ACAGAAATCG ATGCGCTTCG GCGTGAAAAT GAGAGGCTGA AACGCGTTGA AAACGAGGCA
TTTCTGAATG GCAAGCAGGA GCTCGATCTG ATCTACGCAT CGGCCCCAAT CGGACTATGC
CTTATTGACA CTGATACCCG GTACCTTCGT ATCAACAGAA TTTTTGCGGA GATGAATGGA
TATTCCATCG GAGAGCACAT CGGTAAGAGA GTCCGGGAGA TCTTGCCGGA CCTTGCGGAT
GCGGCAGAGG AACTCACGCG AAAGGTTGTA AAGACGGGTG AAGCCGTGCT CAATACGGAG
ATTCAGGGGG AGACCCCGGC ACGGCCCGGT GCGGTGCGGT ACTGGAAAGA GACCTGGTCG
CCGCTCAAGA ATGACCGGGG GGAAGTCGTG GCTATCAATA TAGTCGCCCG GGAGATCACC
GGGCAAAAGC AAGCCGAGGA TGCATTGCAT CGCAGCGAAG GGCAACTGGC GCTCGAGGTA
GAAACGCTGA CCAAACTCCA CACCTTCAGC ACCCGTCTGC TCGCGATGTC GGATATCGAA
ACCGTGGCGC AGGAAGCGCT GGATGAGCTG ATCGATCTGG TCGGCGCGGA GATGGGAACC
CTTCAGGTCT ACGACCCTGT TACCGGCGGC TTGAAATTTA TGGCGACCCG AGCCCTCGAT
GAGGCCGCGA TCGCGTCCCT GCCGGCAGTC ATCGCTCCGG ATTACCCCTC GACATGCGGC
CGTGCGCTGA AGACGCGGCA ACGCATTATC GTTGAGGACA CTCTGAGCGA TCCTGCTGCG
GCCGCCCATC GCACGCCCGC TGCCAAACTC GGCTACCGGG CGGCTCAAAG TACGCCGCTG
CTCGCCAACG GTGAACTCTT CGGCATGATC TCAACGCACT TCCGTCAGCC GCATCACTTC
ACGGAGCATG ATCTGCGGTT GATCGATCTG GCGGCATCGC ACACCGCTTC GCTCATGGAA
CGAACGCGTG CGGCCGAGAT ATTGCGCGAG AGTGAGGAAC GTCTGTCTCT CGCGCTCGAA
GCCGCCCAAT TCGGGACGTT CGACTTCGAC CTCAGGACCC GGAAGGCCAA CTGGGACGAA
CAATCGAAAC GGATATTTGG CGTCTCCGGA AGGGGGGGGC CTGGATACGA AGGGTTCATC
GGGTTAATTC ATCCCGACGA TCGGGCGCGG GTTGAGGCTG TGCTTGCCCG GGCCTTCGAT
CCGGCCACAG ACGGTACCTA CGAGACCGAG TTTCGCATTA TCCGCCCGGA TGGCGGTATG
GTGTGGAACC GGACGGCAGG GAAGATGTAC TTCGAGGGCG AGGGACCGGA ACGAAAGGCT
GTTCGTCAAC TTGGAATAAA CCAGGATATC ACCGAGCGCA AGAGGGAGGA AGAGGCGCTC
AAGCGGCATA CCGCCGAGCT CGCCAGGCTC CACCGCGACC TGAAGATAGC AAACCGGGAG
GCGAACCTGT ATCTCGACAT CCTGACCCAC GACATCGGCA ACACCGAGAA TGTCTCGAAT
CTCTATGCCG ACATTCTGAT CGAGGCATTG CAGGGGAAGG AGGAAGAGAT CGGATACGTG
AAAAAACTCC AGCGTAGCGT CCAGAAGAGC ATCGAGATCC TGAGGACCGT CTCCACCATC
CGCCGGATTC ATCGGACGAC CTCCGAACTC CGGCCGGTGG GTCTGGATGC GGCGATCAGG
GGAGTGATCC GGAGCTCCCC GAGCAGCACC ATTCTCTACG ACGGAGCGAG TTCCCGGGTA
TGGGGCGACG ATCTGTTCCC GGTGGTCATG GATAATCTCG TCGGCAATGC CGTCAAGCAC
GGCGGTCCGG ATGTCGAGAT CGTCATCCGG GTGGAAGAAC TGGACGGCAG GGTGCTGGTC
TCTGTCGAGG ATACCGGGCC GGGTGTCCCT GACACAGAAA AGCAGGAGAT CTTTCACCGA
TACGAGCAGA AACGCCGGGG CGTCGGCGAA GGGCTCGGGC TGTACCTCGT GCGGATCCTG
GTCGAGCGCT ACGGTGGAAT GGTCTGGGTC GACGATCGGG TGCCGGGCCG GCCGGAGGAA
GGGGCGGCGT TCCGGTTCAC GGTTGCAACG GCGCCGGAGA GTGACTGA
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| Protein sequence | MPSPSENIPE CSYPAGQGKT APEISGEVEQ CVRERLQEFQ TEIDALRREN ERLKRVENEA
FLNGKQELDL IYASAPIGLC LIDTDTRYLR INRIFAEMNG YSIGEHIGKR VREILPDLAD
AAEELTRKVV KTGEAVLNTE IQGETPARPG AVRYWKETWS PLKNDRGEVV AINIVAREIT
GQKQAEDALH RSEGQLALEV ETLTKLHTFS TRLLAMSDIE TVAQEALDEL IDLVGAEMGT
LQVYDPVTGG LKFMATRALD EAAIASLPAV IAPDYPSTCG RALKTRQRII VEDTLSDPAA
AAHRTPAAKL GYRAAQSTPL LANGELFGMI STHFRQPHHF TEHDLRLIDL AASHTASLME
RTRAAEILRE SEERLSLALE AAQFGTFDFD LRTRKANWDE QSKRIFGVSG RGGPGYEGFI
GLIHPDDRAR VEAVLARAFD PATDGTYETE FRIIRPDGGM VWNRTAGKMY FEGEGPERKA
VRQLGINQDI TERKREEEAL KRHTAELARL HRDLKIANRE ANLYLDILTH DIGNTENVSN
LYADILIEAL QGKEEEIGYV KKLQRSVQKS IEILRTVSTI RRIHRTTSEL RPVGLDAAIR
GVIRSSPSST ILYDGASSRV WGDDLFPVVM DNLVGNAVKH GGPDVEIVIR VEELDGRVLV
SVEDTGPGVP DTEKQEIFHR YEQKRRGVGE GLGLYLVRIL VERYGGMVWV DDRVPGRPEE
GAAFRFTVAT APESD
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