Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Memar_0859 |
Symbol | |
ID | 4847913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanoculleus marisnigri JR1 |
Kingdom | Archaea |
Replicon accession | NC_009051 |
Strand | + |
Start bp | 835373 |
End bp | 836263 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640115544 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001046774 |
Protein GI | 126178809 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.826184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTCAG TCGTCGGGCA TACCGCCGTC GACCATCTCT TCCGGGTGCC GAAACTCCCC GGGCGGCACA ACTCGACCTA CATCACCGGT CACGAGGTCT ACTTCGGCGG CGGGGCGGCG AACATCGCGG CCGGGATTGC GATGCTCGGC GAGCGATGCC GGCTGGTCTC TCTGGTCGGC GGCGACTTCC CGGGCAGCGA CTATGATCGG TGGCTGCACA GCCTCGAGAT CGTGCAGGAC TTCACCCAGG TGAAGGATGC CCGGACCGCG ACCGCGTACG TCTTCACCGA CGACGACGGC GACCAGGAGA CCTTCTTCGA GTGGGGCGCG TCGACCGCGT TCTCCCGCGC GGAGGCTCCC GCTCTCGACT TCGTCCACAT GGCGACGGCC GACCCCGACT TCAACGTCCG GGTGGCCCAG AAGAGCAAAT TCGCCTCTTT CGACCCGGGG CAGGATCTCC TCCGCTACAC CCGTGATCAG CTCGAGATCA TCCTCGCGAA CATCGATATC CTCTTCTCGA ACAACCACGA GATGGACCGG ATGTGCGAGA TGCTGGGGCT GGAGCGCTCC GCACTCGTCG CGTCGATCCC GATGACGGTC ACGACCCGGG GGGCGGAGGG GAGCATCCTC TGCGTGGACG GCGAGGAGTT CCACGTCCCG GCCGTCGCGG TCGAGGCCGT CGACCCCACC GGCGCCGGCG ACGGCTACCG TGCCGGGTTC CTCACGGCGT TCCGGAAGGG CCACGCCCCG CTCGACTGTT GCCGCGTCGG CGCGGTGGTC TCGTCCTTCG TCGTCGAGCG GCCGGGCACC CAGACGAACC TCCCCGACTG GGAGCGGATG CTTGCCCGGT ACCGGAAGGT CTTTGACGAG CCCGGCGAAA TTATTGTCTG A
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Protein sequence | MISVVGHTAV DHLFRVPKLP GRHNSTYITG HEVYFGGGAA NIAAGIAMLG ERCRLVSLVG GDFPGSDYDR WLHSLEIVQD FTQVKDARTA TAYVFTDDDG DQETFFEWGA STAFSRAEAP ALDFVHMATA DPDFNVRVAQ KSKFASFDPG QDLLRYTRDQ LEIILANIDI LFSNNHEMDR MCEMLGLERS ALVASIPMTV TTRGAEGSIL CVDGEEFHVP AVAVEAVDPT GAGDGYRAGF LTAFRKGHAP LDCCRVGAVV SSFVVERPGT QTNLPDWERM LARYRKVFDE PGEIIV
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