| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0829 |
|---|
| Symbol | |
|---|
| ID | 4846487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanoculleus marisnigri JR1 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009051 |
|---|
| Strand | - |
|---|
| Start bp | 809898 |
|---|
| End bp | 810374 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640115514 |
|---|
| Product | peptidase, zinc-dependent |
|---|
| Protein accession | YP_001046744 |
|---|
| Protein GI | 126178779 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1913] Predicted Zn-dependent proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.435908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGA TGATCCTCGG GAAAGAACCC GAACTCGTCG AATACCCGTT TCTCATCGAC
GGTTACGACC GGAACCGCAA CCAGCACGAT GCTCAAAAGA TCCTGGATCG CCTGCAGGAC
ACCCTCACGC GCAGGTACGA TATCGACGGC CCCCTGCTGC TCGTCACCTC CCGCGACCTC
TACGTCAACG GATGCGACTT CGTCTTCGGC CTCGCACGGC CGGCATGCGG CGTCGCCGTC
GTCTCGACCG CCCGCCTCGG GAACGACTAC TACGGCAGGA CGCCGGACGA CACCGACCTC
ATCGACCGGA CGGCAAAAGA GGGCGCGCAC GAACTCGGGC ATCTCCTCGG GCTCGACCAC
TGCGAAAACT CCGAGTGCGT CATGTTCCGG CCGAGAACCC TGGACGAACT GGACAGAAAG
AGAAAGATGC TCTGTCCGGC CTGCAGGGAG GCGCTCGCGT CATTAGGCGG GCGATGA
|
|---|
| Protein sequence | MIAMILGKEP ELVEYPFLID GYDRNRNQHD AQKILDRLQD TLTRRYDIDG PLLLVTSRDL
YVNGCDFVFG LARPACGVAV VSTARLGNDY YGRTPDDTDL IDRTAKEGAH ELGHLLGLDH
CENSECVMFR PRTLDELDRK RKMLCPACRE ALASLGGR
|
|---|
| |