| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0725 |
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| Symbol | |
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| ID | 4847607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | - |
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| Start bp | 702466 |
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| End bp | 703698 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640115408 |
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| Product | hypothetical protein |
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| Protein accession | YP_001046640 |
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| Protein GI | 126178675 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1232] Protoporphyrinogen oxidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00111805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCT GCGTTGTGGG GGGAGGTCTT TCCGGTCTGG TCTCGGCGCT CGAACTCGCC
GGGACACACC AGGTGGATCT CTTCGAGCGA AGGCCGATTC CGGGCGGCTG CCTCGGTTCA
TACCGGATCG GCGATTACTG GATCGAGGAG TATTACCACC ATTGTTTTGC CGGTGATACC
GCCCTGCTCG ACCTCTTCGA TGCGCTGCAG GTGACAGATC GGCTGGTATG GCTTCACGGG
TCCACCGGCT ACTACGTCGA CGGAACTCTC CACCCGCTCA CCACCCCGAC CGAGATCCTG
CGCTACCCCC ATCTCACGCT CATGGAAAAG GCCCGTCTCG GCCTGCTGAC CCTGCGCTCC
CGCCGGTTCG ACGTCTCGGC GCTCGACGAG ATCACCGCGA AGGATTTCAT CCTCGATAAC
CTCGGTCCCG GGATATACTC CTCGTTCTTC GAACCGCTCT TAAAAAGCAA GTTCGGCGAC
CGCCGTGATG AGGTTTCCGC CGCCTGGCTC ATATCCCGCA TCGCCATCCG ATCCGACCGG
GGTGCCGGGG GCGAGCGTCT GGGCTACCTG AAAGGGGGTT TCCGGCACTT CGTCGCGCGG
CTCGAGGAAG AGGCAGCGCA ACGGGGCGCC TCGATCCTGC CGGACACTCC CGTCGAAGAG
ATCCGGCGGG AGGGCGGCGG CTGGGTCGTC AACGGGAGAT CGTATGACGC CGTCGTATCG
ACGCTCCCCC CGCAGGCAAC CGCGGACCTT GCCGGTCTCG ATCTCGCCGA AATTCCCTAC
CAGGGCGCCG CCTGCATGAC CCTCGCGCTC GACCGGGACG TGACCGACGG AATATACTGG
CTGAACATGA AGGATGCCGC CCCTTACGGT GCGGTGGTCT CGCACACCAA CTTTGCCCCG
CTCGAGTGGT ATGGGGAGCA TATCGTCTAC CTTGCATCCT ACTTCACCGG CCGGCTCCCG
GAAGGATTCG AGCAGTCGAT GCTTGCCGAC TTCTGCCGGC GATTCTCCGT CAGTGAACGC
GAAGTCCACT GGCACCGGCT CGCGGTCGAC CCGTATGCCG GCCCGGTCTA CACGACGGGG
CTCCGTAACC GGCTGCCCGA CTACGAGGAG CACGGACTCT TCCTCGCCGG GATGTTCAGC
CCTCCGAATT ACCCGGAGCG GAGCATGAAC GGTTCGGTCG TCGCCGGGCA GGAAGCGGCG
AAGAGGGTTC TCGCGAGGTA TCCGGATGCG TGA
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| Protein sequence | MKICVVGGGL SGLVSALELA GTHQVDLFER RPIPGGCLGS YRIGDYWIEE YYHHCFAGDT
ALLDLFDALQ VTDRLVWLHG STGYYVDGTL HPLTTPTEIL RYPHLTLMEK ARLGLLTLRS
RRFDVSALDE ITAKDFILDN LGPGIYSSFF EPLLKSKFGD RRDEVSAAWL ISRIAIRSDR
GAGGERLGYL KGGFRHFVAR LEEEAAQRGA SILPDTPVEE IRREGGGWVV NGRSYDAVVS
TLPPQATADL AGLDLAEIPY QGAACMTLAL DRDVTDGIYW LNMKDAAPYG AVVSHTNFAP
LEWYGEHIVY LASYFTGRLP EGFEQSMLAD FCRRFSVSER EVHWHRLAVD PYAGPVYTTG
LRNRLPDYEE HGLFLAGMFS PPNYPERSMN GSVVAGQEAA KRVLARYPDA
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