| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Memar_0641 |
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| Symbol | |
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| ID | 4847840 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanoculleus marisnigri JR1 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009051 |
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| Strand | + |
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| Start bp | 613791 |
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| End bp | 614801 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640115323 |
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| Product | tRNA splicing endonuclease |
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| Protein accession | YP_001046556 |
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| Protein GI | 126178591 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTGGCGA TATTCGACGG AACCTGGGTA CGCCTCGGCG GTGAAGGGCG GGCGCTCTAC
GAGCAGGGCG GCTACGGCAG GCCCGAGGGA CGCGGCCTCC GCCTCTCTCC CGAAGAGGCG
CTCTACCTCA TGGAACGAAA CAAGATCGAC GTGAAAGACT TCGGTTTTGA CGCCCTGCTC
GGCCTCTTTG CCGGCCAGCC GAACTTCATC CGCAGGTACC TCGTCTACCG CGACATCCGC
GAGCGAGGAT ACGTGATCCA GCCCGGCCCG CAGGATTTCC GCGTCTTCCG CCGCGGCCAC
AAGCCCGGCG CCGGGAAGTC CCGGTACCTG ATCCGGGTCC TCTCCGAGCG CGACATCGTC
GACTTCGACC GGTTAAGCCA GGACGTGGTC GCTGCGGTCA ACATGCGCAA GCAGTACCTC
CTCGCGGTCG TCGACGACGA GGACGAACTG ACCTACTACG AGGTGCGGGT ACAGGACCTT
CCCGGAGTCG GGGAGCCTGC GGGGTGCACA ACACCGGTGG AGGCCACGCT CTTCGGGACA
TACGCGCTCG CCCACCTGCC GCCGGGAACC CCGCTCGAGG AGGACTGGTA CGGCAAGAGA
CTCGATACCG AACGGCTGCT CCTCCGCCCG GTCGAGTCGA TCTACCTCAT GCGCAGAGGC
TGTCTCTCGA TCACGCAGGA TGAGGAACCG ATGGCCGCAG AGCAGTTCCT CGATGCGGCG
GCAGAAAAGG ACGTCGAGAT ACGGGAGAAG GAGCGGGTCT TCTCAGACCT CCGGGAGAAG
GGCTACATCC CGAGAACCGG GTACAAGTTC GGCCACCACT TCCGCGTCTA CTCCGGGAAG
AAGAGCCATT CCGAGATGCT CGTCCATGCC GTTCCGTCCG GGACGTCCAC GCCGATGAGC
GCCGTCTCCC GCTCGGTCAG GCTTGCTCAC AGCGTCAAAA AGAAGATGTT GTTTGCCTGC
ATATATAACA CCGATATCAG ATACGTCGAA TTCGCCCGAA TAAAACTGTG A
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| Protein sequence | MLAIFDGTWV RLGGEGRALY EQGGYGRPEG RGLRLSPEEA LYLMERNKID VKDFGFDALL
GLFAGQPNFI RRYLVYRDIR ERGYVIQPGP QDFRVFRRGH KPGAGKSRYL IRVLSERDIV
DFDRLSQDVV AAVNMRKQYL LAVVDDEDEL TYYEVRVQDL PGVGEPAGCT TPVEATLFGT
YALAHLPPGT PLEEDWYGKR LDTERLLLRP VESIYLMRRG CLSITQDEEP MAAEQFLDAA
AEKDVEIREK ERVFSDLREK GYIPRTGYKF GHHFRVYSGK KSHSEMLVHA VPSGTSTPMS
AVSRSVRLAH SVKKKMLFAC IYNTDIRYVE FARIKL
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